Gene Dfer_1219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1219 
Symbol 
ID8224790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1446973 
End bp1447860 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content52% 
IMG OID644929081 
Productoxidoreductase 
Protein accessionYP_003085633 
Protein GI255035012 
COG category[R] General function prediction only 
COG ID[COG1092] Predicted SAM-dependent methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.00837631 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00166496 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGATACTAC TTTCACCAGA CCAACATACC GACTACCAAC TGATCGATAG CGGCGGATTC 
GAGAAACTTG AAAAATTCGG CCCATATGTC CTTTCGCGGC CTGAGCCGCA GGCCATTTGG
GACAAGTCGC TTTCGGAAGC GGAATGGGAC AAGCGCTCGA ATGCGGTTTT CAAAAAGGAT
AAGAACTCGC AGGAAAAAGG CCAGTGGATC ACCAAAGGCG ATATGCCTGA TAAGTGGGTG
TTCCAGTACC GCACCAAAGA GCTGCATTTG CGTACGAAAC TCGCATTGTC GTCATTCAAG
CACGTAGGCG TCTTTCCCGA GCAGGCTACC AACTGGGATT TCATCGCGCG GACATTGAAA
CAAATGCCCG AGGACAAGCC CTCGGTACTC AACCTGTTTG CCTACACCGG CATCGCGTCG
CTGGCGGCAA AGGCGTCGGG CGCGGACGTG ACGCACGTTG ATTCGGTGAA GCAGGTGATC
AGCTGGTCGC GGGAAAATAT GGACCTGAGC GGCCTGAGCA ACATCCGCTG GGTGGTGGAA
GATGCATTGA AATTCGTGCA GCGTGAGGTA CGGCGGGGGA ATAAATACAA TGGCCTCATC
CTCGATCCTC CTGCTTACGG GCGCGGACCG GATGGCGAAA AATGGCTACT CGAAGAGAGC
CTGAATGAAC TCCTCAGGCT GTGCGCACAG TTATTGAAGG ACAAGAACTT CTTTTTTATC
ATCAACCTGT ACTCACTTGG TTTCTCGGCG CTGATCGTCG AAAACCTGAT CAAGGCGCAT
TTCGGGACAG AGATAAAGCA TGAGTTCGGC GAACTTTTCA TTCCCGATTC ATTTGGTAAA
AAACTTCCAT TGGGCGTGTT TTCGCGTTTT TCGGACCAGA ATGTGTAG
 
Protein sequence
MILLSPDQHT DYQLIDSGGF EKLEKFGPYV LSRPEPQAIW DKSLSEAEWD KRSNAVFKKD 
KNSQEKGQWI TKGDMPDKWV FQYRTKELHL RTKLALSSFK HVGVFPEQAT NWDFIARTLK
QMPEDKPSVL NLFAYTGIAS LAAKASGADV THVDSVKQVI SWSRENMDLS GLSNIRWVVE
DALKFVQREV RRGNKYNGLI LDPPAYGRGP DGEKWLLEES LNELLRLCAQ LLKDKNFFFI
INLYSLGFSA LIVENLIKAH FGTEIKHEFG ELFIPDSFGK KLPLGVFSRF SDQNV