| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1208 |
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| Symbol | |
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| ID | 8224779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 1430877 |
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| End bp | 1433147 |
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| Gene Length | 2271 bp |
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| Protein Length | 756 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644929070 |
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| Product | aconitate hydratase |
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| Protein accession | YP_003085622 |
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| Protein GI | 255035001 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1048] Aconitase A |
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| TIGRFAM ID | [TIGR01340] aconitate hydratase, mitochondrial
[TIGR01342] aconitate hydratase, putative, Aquifex type |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.2348 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0471939 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTTTG ACTTAGATAT GATCAAGGGC GTTTACGCCC GAATGGAAGA AAGAGTTGAA
GCCGCCCGTA AAATTGCCGG GCGGCCTTTA ACCCTCGCAG AAAAGATTTT ATACTCCCAT
TTGTGGGAAG GAACGGCAAC CCAGGCTTAC GAGCGTGGGA AGTCTTATGT GGATTTCGCT
CCGGACCGCG TTGCGATGCA GGATGCCACC GCTCAGATGG CGTTGTTGCA ATTTATGCAG
GCGGGCCGTC CGAAAGTAGC GGTTCCTTCT ACCGTCCATT GCGATCACCT GATCCAGGCC
GAAGTGGGCG CTGTGCAGGA TTTGAAGAAT GCCGTAGATA AAAATAAAGA GGTTTACGAT
TTCCTGTCGT CCGTATCCAA CAAATACGGC ATCGGCTTCT GGCGCGCAGG CGCGGGTATC
ATCCACCAGG TGGTACTCGA AAACTACGCA TTCCCCGGCG GGATGATGAT CGGTACCGAT
TCGCATACGC CTAATGCGGG CGGGCTCGGT ATGATTGCCA TCGGCGTTGG TGGTGCGGAT
GCGTCCGACG TAATGTCGGG ACTGGCGTGG GAACTGAAAA TGCCCCGCCT GATCGGAGTG
AAGCTCACCG GTAAATTAAG CGGGTGGACA GCTGCGAAGG ACGTGATCCT TTGGGTTGCC
GGCCAACTTA CCGTGAAAGG CGGAACGGGC TATGTGGTAG AGTATTTCGG CGAAGGAGCT
GAAAGCTTAT CCGCGACCGG AAAGGGCACC ATTTGCAATA TGGGCGCTGA AATCGGGGCA
ACGACGTCCA TTTTTGCGTA CGACGAGAAA AGTGCGGCGT ACCTGAGAGC GACCGACCGT
GCCGACGTGG CCGATGCTGC GGACAAAATC AAAGGACATC TTCGTTCCGA TGATGAAGTG
TATGCGGACC CGGCTGCTTA CTATGATCAG CTTCTCGAAC TGGACCTTTC CACGCTTGAA
CCGCACATTA ACGGTCCATT TACGCCGGAC CTGGCCTGGC CGCTTTCCAA ATTCGCCACG
GCGGTGAAAG AAAACGGATG GCCGGAGGTG CTTTCGGTCG GTTTGATCGG CTCGTGCACC
AACTCTTCGT ATGAGGACGT GAGCCGTGCC GCTTCGCTGG CCAAGCAGGC TGTTGATAAA
AAATTGCAGG TAACTTCCGA ATACACCATT ACGCCCGGCT CCGAGCAGGT GCGCTATACG
GTAGAGCGGG ATGGTTTCCT GGATACTTTC GAGCAAATCG GAGGCGTGGT GCTGGCCAAT
GCCTGTGGGC CATGTATCGG TCAATGGGCG CGGCATGGCG CGGAAAAAGG GGAGAAGAAC
TCCATCATCA CGTCATTCAA CCGCAACTTC TCGAAACGGG CGGATGGCAA CCCCAACACG
CACTCTTTCG TGGCATCGCC TGAAATCGTG ACGGCCATGG CCATTGCCGG GCGCCTGACG
TTCGATCCAC GCGTGGACAA GCTCGTCAAC ACCGACGGCG TGGAAGTGCT GCTCGACGAA
CCAACAGGTC TTGAACTGCC CACAAGAGGA TTTGCCGTGG AAGATGCCGG TTACCAGGCT
CCGGCCGAAG ACGGAAGCCA GGTTCAGGTG CTCATTAGCC CCACTTCCGA CCGTTTGCAG
CTCCTCGAAC CATTTGCTGA ATGGGAAGGA ACAGATCTGA AGGGTTTGAA ACTGCTCATC
AAAGCGAAAG GCAAGTGTAC CACCGACCAC ATTTCCATGG CCGGCCCGTG GCTGAAATAC
CGCGGACACC TCGATAACAT CTCGAACAAC ATGCTGATCG GCGCGGTGAA CTATTACAAC
GAGAAAACCA ACACGATCAA GAACCAGCTC AACAACCAGT ATGCGGAAGT TCCGGCCGTC
CAGCGCGACT ATAAGGCGCA CGGCATCGGT ACGATCGTGG TTGGTGACGA AAACTACGGC
GAAGGATCAT CCCGCGAGCA TGCCGCCATG GAGCCCCGCT TCCTGGGCGT ACGCGCGATT
TTGACCAAAT CATTTGCCCG TATCCACGAA ACCAACCTGA AAAAGCAGGG AATGCTGGCG
CTGACGTTCG CAAACACATC GGATTACGAC AAAATCCAGG AGGACGACAC GATCGATATC
CTGGGCCTTG AAACCTTTGC AGAAGGACAG CCGCTGACTA TCGTGCTGCA CCACAACGAC
GGTACCAACG AGGAATTCCC CGTGAACCAT ACCTACAATG CCCAGCAGAT CGAATGGTTC
AAAGCAGGTT CTGCATTGAA CATCATCCGC AAGTCGGTTG GCGCCGCGTA G
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| Protein sequence | MAFDLDMIKG VYARMEERVE AARKIAGRPL TLAEKILYSH LWEGTATQAY ERGKSYVDFA
PDRVAMQDAT AQMALLQFMQ AGRPKVAVPS TVHCDHLIQA EVGAVQDLKN AVDKNKEVYD
FLSSVSNKYG IGFWRAGAGI IHQVVLENYA FPGGMMIGTD SHTPNAGGLG MIAIGVGGAD
ASDVMSGLAW ELKMPRLIGV KLTGKLSGWT AAKDVILWVA GQLTVKGGTG YVVEYFGEGA
ESLSATGKGT ICNMGAEIGA TTSIFAYDEK SAAYLRATDR ADVADAADKI KGHLRSDDEV
YADPAAYYDQ LLELDLSTLE PHINGPFTPD LAWPLSKFAT AVKENGWPEV LSVGLIGSCT
NSSYEDVSRA ASLAKQAVDK KLQVTSEYTI TPGSEQVRYT VERDGFLDTF EQIGGVVLAN
ACGPCIGQWA RHGAEKGEKN SIITSFNRNF SKRADGNPNT HSFVASPEIV TAMAIAGRLT
FDPRVDKLVN TDGVEVLLDE PTGLELPTRG FAVEDAGYQA PAEDGSQVQV LISPTSDRLQ
LLEPFAEWEG TDLKGLKLLI KAKGKCTTDH ISMAGPWLKY RGHLDNISNN MLIGAVNYYN
EKTNTIKNQL NNQYAEVPAV QRDYKAHGIG TIVVGDENYG EGSSREHAAM EPRFLGVRAI
LTKSFARIHE TNLKKQGMLA LTFANTSDYD KIQEDDTIDI LGLETFAEGQ PLTIVLHHND
GTNEEFPVNH TYNAQQIEWF KAGSALNIIR KSVGAA
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