| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1205 |
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| Symbol | |
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| ID | 8224776 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 1426976 |
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| End bp | 1428796 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644929067 |
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| Product | peptidase M61 domain protein |
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| Protein accession | YP_003085619 |
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| Protein GI | 255034998 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3975] Predicted protease with the C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.440173 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAC TGGCTGCATT GCTGGCTACG CCCTTGATAT GCTCGTACGC ATTCGCGCAG
AAGATCCAAT ATGATGTATC GTTCCCGAAC ATCGTTCACC ACGAAGCGCG GATCGCCCTG
AGTGTGTCCG ACGCGCCCCA GAAAGAGCTG CTGTTCAGAA TGTCGCGCTC GTCGCCCGGC
CGCTACGCGA CGCACGAGTA TGGGAAGAAT GTGTATGATG TGAAAGCATT CGATAAGTCG
GGCAAGCCGG TGGCCATTGC GCGCGTGGAT GGGGACGTGT ACAAGGTTTC GGGCATTGAT
GGGTACGTGC GGGTGGAGTA TATCCTCTAT GCCAACCACG CCGACGGCAC CTATGCGGGC
ATCGACCAGA ACAGCGTACA TTTGAATATG CCCGCCGCAT TCATGTGGGT GAAAGGTCTG
GAAAAATCGC CGATGGAAAT ACGCTTTGAT TTGCCGCAAA ACAGCCAGTG GACGATCGCG
ACGCAGCTTA AAACGACGGC TGACGCCCAC ACGTTCACCG CACCGGATTT GCAATATTTC
ATGGATTCAC CCACGAAAAT CGGTAAACTG ACCGTCAAGG ATTGGAACGT TCCCAATGCC
GACAGCAAGC CAGCGCGGTT CCGGCTCGCA CTCGAAGCGA AAAGCAGCGA CTCGCTGGCG
ACCGTATTTG CCAACAAAAT AAAGCGCATT ACGGAAGAAG CAAGAATGGT TTTCGGCGAA
TTTCCGGCGT TTGACAACGG CCATTACACG TTCCTGGCGA GCATCAATCC CTACGTGAAA
GGCGACGGCA TGGAGCACCG CAACAGCACG ATGATCAGCG TGCCGGTGGT TTTCAACGCT
TCCGATAACC TGCTGGGCGT ATTCTCGCAT GAGTTCTTTC ATGCCTGGAA CGTCGAGCGC
ATTCGTCCGA AAACACTCGA ACCATTCAAT TTCGAGAAGA GTAATATGAG TTTCGAACTC
TGGTTTGCCG AAGGTTTTAC CCAGTATTAT GGAGAATTAC TGCTTGAAAG GGCTGGATTC
CATTCGGTCG ACGAGTATTG CAATATCTTG GGCATGCTCG TAAATGCCAA GGAAAATACG
GTCGGTGCCA GGCGCATTTC CCCGGTGGAA GCGAGCTGCA ATGCGGTTTT TGTAGACGCA
GGCGTGGCTG TCGACAAGGC GAATTATCCC AATATGCACA CTTCCTATTA CACCTACGGA
GCGGCCCTAG CGCTCGCATT GGATCTGCAA TTAAGGGAAA AGGGCCTCAA TCTCGATGAT
TTCATGAAAG CCGTTTGGGC CAAACACGGT AAGCCGGAAG CTGCGTACAA CGTGGCCGAT
CTGCAAGCTG TTTTAGAATC CTACACCCGT GACAAGGCGT TCGCGCAGCG TTTTTTTTCC
AAATATATCA GCGGCCACGA GTCGATCGAC TACGCGCCGC TGCTTGCGAA GGCCGGTTTG
CTGCTGAGGA AACAATTTGA GGGCCAGGCC TGGATCGGCG ATTTCGTGCG GTACAAGGAA
GGCACCGGAC TGACGATAAC AACGAACACC ACCATCGGTA GTCCGCTCTA CACCGCCGGA
CTGGACATCG ACGACGAAAT TTTGAAAGTG GACGGAAAGG TGATCTCGAC GAATGACGAA
CTCCTCGCCA TTCTCAAAGC GCACAAGCCC GGCGATCAGA TCACGGTAGA ATACCGGCAC
CGCGACGATT ACAAAACGGC CGTGGTGGAA ATGGTGCAAC ATCCGCGGTG GCAGGTAGCG
ACGTTCGAGC AGGCCGGGAA AACGGTTACG CCGGAAATGC AGACGTTCAG GAATGCGTGG
CTGGGAAGCA AATGGAAGTA A
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| Protein sequence | MKKLAALLAT PLICSYAFAQ KIQYDVSFPN IVHHEARIAL SVSDAPQKEL LFRMSRSSPG
RYATHEYGKN VYDVKAFDKS GKPVAIARVD GDVYKVSGID GYVRVEYILY ANHADGTYAG
IDQNSVHLNM PAAFMWVKGL EKSPMEIRFD LPQNSQWTIA TQLKTTADAH TFTAPDLQYF
MDSPTKIGKL TVKDWNVPNA DSKPARFRLA LEAKSSDSLA TVFANKIKRI TEEARMVFGE
FPAFDNGHYT FLASINPYVK GDGMEHRNST MISVPVVFNA SDNLLGVFSH EFFHAWNVER
IRPKTLEPFN FEKSNMSFEL WFAEGFTQYY GELLLERAGF HSVDEYCNIL GMLVNAKENT
VGARRISPVE ASCNAVFVDA GVAVDKANYP NMHTSYYTYG AALALALDLQ LREKGLNLDD
FMKAVWAKHG KPEAAYNVAD LQAVLESYTR DKAFAQRFFS KYISGHESID YAPLLAKAGL
LLRKQFEGQA WIGDFVRYKE GTGLTITTNT TIGSPLYTAG LDIDDEILKV DGKVISTNDE
LLAILKAHKP GDQITVEYRH RDDYKTAVVE MVQHPRWQVA TFEQAGKTVT PEMQTFRNAW
LGSKWK
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