| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1184 |
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| Symbol | |
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| ID | 8224755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 1407753 |
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| End bp | 1409192 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644929046 |
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| Product | transcriptional regulator, GntR family with aminotransferase domain |
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| Protein accession | YP_003085598 |
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| Protein GI | 255034977 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.823264 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGAAC AGCTCCTGCG GGAAGATTTC CTTTATTCCC AAATCGCCGA CAGGCTCGCG
ACGCAGATCG AAAAGGGCAT TCTCAAAGCC GGCGACCGGC TCATTTCGCT CCGGGCGCTG
AGCAAGGAGC AGGGAATCAG TCTGAGCACG GCATTTAAGG CCTATGTTGA ACTGGAAAAC
AAAGGTGTGA TCGAGGCAAG ACCGAAATCG GGCTATTTTG TGCGCTTTTC ACCCCTCAAT
GCGCCGGAAA GGCTACCGAG CATTGCGGCC GGCCCGGTGA TAGAGAAGTC GAATGTGGAG
GAAATGATCC GGACGGTGTA CAAAACCATG ACGCATGAAC GGATTATCCG GCTGTCGGTC
GCTGCGCCAT CCGCCGAGCT CATCCCGGAA GCGAAGCTGA ACAAGGCGAT GATCGAAGCG
CTGCGAAAAA GCCCGCACAG CTGCACGCAA TACGAGGCCG TGCAGGGAAA TCCCGCATTG
CGGAAACAGA TTGCCAAATA TGCATTCAAC TGGAAAGGAA ATGTGAGCGA GGACGATGTG
ATCACGACGC AAGGCTGCAT GGAAGCGCTC ATTTTTTGCC TCAAAGCCGT CACCGAGCCC
GGCGACACGG TAGCCATTGA AAATCCGATC TACTTCGGGA TTTTCAACAT AATGAAGAGT
CTGGGATTAA AAGTCCTCGA AATCCCCTGC CACCCCGACG ACGGCGCCGA CCTGGAATAC
CTTCAAGACG CGCTCGAAAC CGTGCCGGTG AAGGCGGTCC TGTTTGTGCC CAACTTCTCC
AACCCCACCG GAGCGCTCAT GCCCGATCAC CGTAAAAAGC AACTGGTCGA AATGCTGGCC
GAACGGCAGA TCCCATTGAT CGAAGATGAT ATTTACGGGG AAATGTATTT TGGCAAAACC
AGGCCGGGTA CTTGCAAAAG TTACGACAAA AATGGTCTGG TAATGCTCTG CGGCTCGGTT
TCCAAAACCC TCGCGCCGGG TTACCGCGTG GGCTGGTGCC TGCCGGGACG GTTCAAGGAT
AAGGTATTGA GTATCAAAAT CATGCATACC GTATCGTCCG CCACCCCTAC CCAGGCGGCC
GTTGCCAATT TCTTTGAAAC GGGCCGTTAC GACCTGCATA TGAGGCATCT ACGGAGAGCA
TTACATACCC AATGCCTGCG TTACGTGCAG GCCATCAGCG ACTATTTCCC GCCCGACACG
CGCCTAGTGC GCCCGCAGGG CGGGTATGTG CTGTGGATTG AAATGAACAA AAACGTGAAT
GCGTTCGAGC TCTTTGAATC CGCCATTCAG GAAAGCATCA GCATCGCCCC CGGCCAGATT
TTCAGCAGCC ACGCCCGGTT CAGCAACTAC ATCCGCATCA GTTTCGGCGC GCCGTATAAC
AGTGTGATTG ATAATGGTTT GAAAAGACTG GGAGAATTGA TCAGAAGGCA ATACTCTTGA
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| Protein sequence | MAEQLLREDF LYSQIADRLA TQIEKGILKA GDRLISLRAL SKEQGISLST AFKAYVELEN
KGVIEARPKS GYFVRFSPLN APERLPSIAA GPVIEKSNVE EMIRTVYKTM THERIIRLSV
AAPSAELIPE AKLNKAMIEA LRKSPHSCTQ YEAVQGNPAL RKQIAKYAFN WKGNVSEDDV
ITTQGCMEAL IFCLKAVTEP GDTVAIENPI YFGIFNIMKS LGLKVLEIPC HPDDGADLEY
LQDALETVPV KAVLFVPNFS NPTGALMPDH RKKQLVEMLA ERQIPLIEDD IYGEMYFGKT
RPGTCKSYDK NGLVMLCGSV SKTLAPGYRV GWCLPGRFKD KVLSIKIMHT VSSATPTQAA
VANFFETGRY DLHMRHLRRA LHTQCLRYVQ AISDYFPPDT RLVRPQGGYV LWIEMNKNVN
AFELFESAIQ ESISIAPGQI FSSHARFSNY IRISFGAPYN SVIDNGLKRL GELIRRQYS
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