| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1159 |
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| Symbol | |
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| ID | 8224730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 1379052 |
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| End bp | 1380449 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644929021 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_003085573 |
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| Protein GI | 255034952 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.78186 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCATGA CGTCAAAGAA GTATTTTCCC TCCCTGCTGC TGGCCCTTTC GCTGGGCGGT
GCCGGTGAGA AGCTGTGTGC CCAAACACTT ACATTAGAGC AGGCCGTAGA GACCGCCGTG
AGCAATTACG GCAGCATTAA GGCCAAAAAT AATTACCTCA ATGCTTCGAG AGCGACGGTA
ATCCAGAGCC GGAAGGAATA CCTGCCCAAT TTCAACCTCT CCGCGCAGCA GGACTACGGC
ACGGTCAACG GCCAGAACGG CCCGCTTTAC GGCATGGGGC TATCGGTAGC TTCGTCGGGG
CTGCCGCTGC CGGACCAAAA CTGGAACTCC GCATTCGGCG CACTGTACCT GACGAACGTC
AACTGGGACT TCTTCGCATT CGGCCGTGCA CGTGAACGCA TTCACGTAGC GCAGTCGGCC
GTGAACCGCG ACCGTGCCGA CCTCGACCAG GAACAGTTCC AGCACAGCGT GCGCGTGGCC
GGGGCGTATC TCAACCTGCT TGCCGCCCAG CGGCTCATCC GGTCGTGGGA AAACAACCTG
GAACGCGCCA ATGCATTGAA AACCGTAGTG GTAACCCGCG CAAAAAACGG GTTGATCCCC
GGCGTGGACT CTTCGCTGGC CAATGCGGAA GTGTCGAATG CCAAGATCAG CATCACACAG
GCGCGCGATT TCGAGCAGGA ACAGGCCAAC ATCCTGGCCC GGCTGATGGG CGTCACCGAG
CAGCGTTTTC AGCTCGATAC ATTGCTGCTC TCCCGAACAC CGCGCATGGC CGCCGAGCCG
GCCGGTAAGC CCGAGAACCA CCCGTTGCTG CGGTTTTATT CCAACCGCAT TGCCGTAAGC
GAGCAGCAGG CCAAATACTT CCACACCCTT GCGATGCCTA CATTCTCGCT GTTTGGCGTG
TTTCAGGGTC GCGGAGCAGG TTTTTCATCC AGCTACGCCG CCGACCAGAC GGCCTACACA
CACAATTATT TCGAGGGTAT CAAACCGGTG AGGTACAATT ATCTGCTGGG GATCGGCGCT
ACCTGGAACA TGACGAGCAT GCTGCGGGTC CGGCAGCAGG TCATGTCACA GAAATTCATT
TCCAATGCAT TGAAAGAGGA ATACGACCTG GCCGATCAGC AATTGAAAAA CCAGCTGATC
CTCTCCGAAA CGAAGATCAG CAATGCTATT GCCAATTACC GTGAGGCGCC GGTACAGGTA
CGATCGGCTT CCGACGCCTA TTTGCAGAAA AGTGTTTTGT ATAAAAACGG CCTCAGCAAT
ATCGTGGACA TGACGCAGGC CCTCTATGTG CTCAACCGCG CCGAAACAAG CCGCGACATC
GCCGCCACAA ACATCTGGCA GGCGATATTA CTCAAAGCAG CGGCAAGCGG CGACATCGGC
ATTTTTCTGA ATCAGTAA
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| Protein sequence | MPMTSKKYFP SLLLALSLGG AGEKLCAQTL TLEQAVETAV SNYGSIKAKN NYLNASRATV
IQSRKEYLPN FNLSAQQDYG TVNGQNGPLY GMGLSVASSG LPLPDQNWNS AFGALYLTNV
NWDFFAFGRA RERIHVAQSA VNRDRADLDQ EQFQHSVRVA GAYLNLLAAQ RLIRSWENNL
ERANALKTVV VTRAKNGLIP GVDSSLANAE VSNAKISITQ ARDFEQEQAN ILARLMGVTE
QRFQLDTLLL SRTPRMAAEP AGKPENHPLL RFYSNRIAVS EQQAKYFHTL AMPTFSLFGV
FQGRGAGFSS SYAADQTAYT HNYFEGIKPV RYNYLLGIGA TWNMTSMLRV RQQVMSQKFI
SNALKEEYDL ADQQLKNQLI LSETKISNAI ANYREAPVQV RSASDAYLQK SVLYKNGLSN
IVDMTQALYV LNRAETSRDI AATNIWQAIL LKAAASGDIG IFLNQ
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