Gene Dfer_1105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1105 
Symbol 
ID8224676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1316887 
End bp1317819 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content58% 
IMG OID644928967 
Productdemethylmenaquinone methyltransferase-like protein 
Protein accessionYP_003085519 
Protein GI255034898 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0684] Demethylmenaquinone methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.200802 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0949582 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTAAAC AAACCTTGCT TGCGGGAGCG TTTGTGCTGG GAAGCGTCGC TTCCCACGCA 
CAGGCGATCT CCCCCACTCC TGACCAGATC AAAGCCTACA CCTCGGCCTG GAAAGGCGAA
CGGATGCCCG ACGGCCGTCC GAAGGTGTCC GACGCGATCC TGGCCCGCCT GAAAAACATT
TCGATGGAAG AGGCATGGGG CGTGCTGCGC AACAAAGGCT ACCACAACCA GTACGAAGGC
GAATGGCAGC TCATCCACAA CGACAGCACC ATGACCGGCC GCGTGGTAAC GGCGCAATAC
ATGCCCTCCC GCCCCGATTT GCAGGATCTC GTGAAGGAGA CCGGTAAGAA AGAAGGCCGC
GTGCAAACCG GCGGCACCAA CTCCTGGCCC ATCGACGTGC TCAAAGAAGG CGATGTGTAC
GTGGCCGACG GCTACGGCAA AATCGCGGAC GGCACGCTCA TCGGCGACAA CCTGGGCAAC
TCCATTTACG CCAAATCCAA GCGAGGGGTG ATCTTTTACG GCTCCGTGCG CGATGTGGAA
GGCCTGAGCG AGATCAAGGG CTTCAATGCC TGGATGAAAG GCCAGGACCC GTCGTACATC
CAGCAAATGA TGCTCACGAA CATCAACACG CCGATCCGCA TTGGCCGGGC GGTGGTGCTC
CCGGGCGATA TCGTGCTGGC CAAAAAGTAC GGTACGATCT TCATTCCGGC ACATCTGGTG
GAAGAACTGG TGCTCACGTC GGAAGTAACC GCCCTGCGCG ACGAATTCGG CCATCTGCGC
CTCCGCGAAG GCAAATACAC GCCCGGCGAA GTGGACACCA AATGGTCCGA AGCAATCCAG
AAGGACTTTT TGAACTGGGT CAACAACTAC CCCGGCAAAC TGCCGATGAC GAAGAAGGAG
TTGGATGATT ATTTGAAGGA AAGAAATTAT TGA
 
Protein sequence
MLKQTLLAGA FVLGSVASHA QAISPTPDQI KAYTSAWKGE RMPDGRPKVS DAILARLKNI 
SMEEAWGVLR NKGYHNQYEG EWQLIHNDST MTGRVVTAQY MPSRPDLQDL VKETGKKEGR
VQTGGTNSWP IDVLKEGDVY VADGYGKIAD GTLIGDNLGN SIYAKSKRGV IFYGSVRDVE
GLSEIKGFNA WMKGQDPSYI QQMMLTNINT PIRIGRAVVL PGDIVLAKKY GTIFIPAHLV
EELVLTSEVT ALRDEFGHLR LREGKYTPGE VDTKWSEAIQ KDFLNWVNNY PGKLPMTKKE
LDDYLKERNY