| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1097 |
|---|
| Symbol | |
|---|
| ID | 8224668 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 1299807 |
|---|
| End bp | 1301333 |
|---|
| Gene Length | 1527 bp |
|---|
| Protein Length | 508 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644928959 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003085511 |
|---|
| Protein GI | 255034890 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.352655 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.684098 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGC TAATTCCGAT ATATCTCATT GCTGCGCTGA CGTTGTCGGC AGGTTCATGT
ACCAACGACT TTGAGGAAGT CAATACCAAC GACAACGTAC CGAACAATGT GACGCCCGAC
CTGCTGCTTG CCGGCGTTAT CCGAAACATG GTCAATAGCC AGGTGAACGA CGCCTGGGGC
ATTGGCAACA TTGTGGTGCA GCACCATGCC AAAATCCAGT TCGTGAACGA GGACCGCTAC
CTCTGGGGAC AGCAGAACGG CATTTGGGAC AATGTGTACG GCAATATGCG TAATGTCAAA
AACATCCTCG ACCAGGTGGG CACCGACGAT GCCAACGGCT ACAAAGGCAT CGCGCTGATC
CTCAAATCAT GGATGTTTGC ACTGGCGACC GACGCTTATG GCGACATTCC ATACACCGAA
GCGACCAAAG GCAAAACCGA CGGCGTTTAC CTGCCCAAAT ACGACACCCA GGAAAGCGTG
TACGCAGGCA TTTTAGCCGA CCTTAGCACG GCTAACAACA TCCTCGCTGC AAGCTCGACA
GCGGTTTCCG GCGACATCCT TTTCGGTGGC GGCACAGGCT CGCTGATCAA ATGGCGCAAA
CTGGCCAACT CGCTGCGGTT GCGTTATTTA ATGCGTATTT CAAAGCAAAA GGATGTGAAA
GCAGAAATGC AGGCTATCCT TGCCGATCCC GCTAAAAACC CCATTTTCGA AGGTAATCAG
GACAATGCCG AATTGAAATA CCTGGCGGCA GCCCCTAACC AATGGGCGCT ATACGGCGCA
CGCGTGGGCT CGTTCGACGA ATTCCGCGTG AGCAAAACCC TCAGCGACCG CCTCACGGCA
TTGAAAGATC CGCGTTTGAC GGTTTTTGGT CGTCCTTCAC AATCGTCGGT GACGGCCGGT
AAGCCGGTGA TCGAAGGTGT GCCCAATGGC CTTGGAGATG TGCCTGCATT GAACTACAAC
GGCGGTCCGC AGGGCGTGTC GCGCATAGGT TACACGTTTG CGTGCCTGGT TTGCAACGAT
CCCGGCCAGG CACCGCCGGA CCCTGCTGCG CCGCGCGGTA TCCTGATGAA CTATTCCGAA
TTGCAGTTCA CCCTCGCCGA AGCGCGCGAG AAAGGCCTGA TCACCACCGG AACAGCAGAA
GGTTATTATA CCAAAGGCGT TCAGAGCAAT TTCGAATACT GGAAAAGCGT CGTGCCTTCG
TCGTACGGCA TTGATGTAAC ACCCGACGCA TCGTACTACA CGCAGCCGGC CGTTGCCTAC
ACCGGTACAA GCGCCGAAAA ACTCGGCAAA ATTGCGCTGC AAAAGTGGAT CGCGTACTAT
TTCAACGGTC TGGAAGCATG GTTCGACTGG CGCCGCACCG GCCTGCCGGA GATCAAACCC
GGCCCCGACA ACCTGAACCA GAACCGCGTG CCGGTACGCT TCATTTATCC GCTCTCCGAA
CAATCCCTCA ACGGCCCCAA CCGCGAAGAG GCCGTAAAAC GCCAGGGAAC CGATGATTTG
AACACCCGGA CCTGGGTGGC GAAATAA
|
|---|
| Protein sequence | MKKLIPIYLI AALTLSAGSC TNDFEEVNTN DNVPNNVTPD LLLAGVIRNM VNSQVNDAWG
IGNIVVQHHA KIQFVNEDRY LWGQQNGIWD NVYGNMRNVK NILDQVGTDD ANGYKGIALI
LKSWMFALAT DAYGDIPYTE ATKGKTDGVY LPKYDTQESV YAGILADLST ANNILAASST
AVSGDILFGG GTGSLIKWRK LANSLRLRYL MRISKQKDVK AEMQAILADP AKNPIFEGNQ
DNAELKYLAA APNQWALYGA RVGSFDEFRV SKTLSDRLTA LKDPRLTVFG RPSQSSVTAG
KPVIEGVPNG LGDVPALNYN GGPQGVSRIG YTFACLVCND PGQAPPDPAA PRGILMNYSE
LQFTLAEARE KGLITTGTAE GYYTKGVQSN FEYWKSVVPS SYGIDVTPDA SYYTQPAVAY
TGTSAEKLGK IALQKWIAYY FNGLEAWFDW RRTGLPEIKP GPDNLNQNRV PVRFIYPLSE
QSLNGPNREE AVKRQGTDDL NTRTWVAK
|
|---|
| |