Gene Dfer_1072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1072 
Symbol 
ID8224643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1269058 
End bp1270005 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content53% 
IMG OID644928934 
ProductPhoH family protein 
Protein accessionYP_003085486 
Protein GI255034865 
COG category[T] Signal transduction mechanisms 
COG ID[COG1702] Phosphate starvation-inducible protein PhoH, predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0267043 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.22845 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTGGAAA AAATCATCAC GCTCGAAGAC GTATCCATGG TAGATTTTCT CGGGATTCAT 
AACTCGAATA TCAAGGAAGT CGCCGCAGCT TTCCCCGAAA GTAAAATTAT TTCACGCGGA
AACGAGATCC GCATCCAGGG GACTGCCCCC GAAATTATCC GAATCACAGA TGTAATCGAC
TCCCTTCTGG CGCATTACCA GAAGTATGGA AAAATAACGA ACGACAATGT CAAGGGCTAT
CTGAACGGCA TTGCGAAAAT GCCGGTGGCC ACCGGTGAGG ACGACGACGA CGTGATCCTC
TACGGCAACA AGGGCCTGGT GGTGAAGGCC AAAACGCCCA ACCAGAAGCT GCTCGTGGAG
CAGGCCGCCA AATACGACCT CGTGTTCGCG ATCGGTCCGG CGGGTACCGG TAAAACCTAT
ACCGCGGTGG CCATTGCGGT GAAGGCATTG AAAAACAAAG AAGTAAGGAA GATTATCATT
ACCCGCCCGG CGGTGGAAGC TGGTGAAAAC CTCGGATTTC TGCCCGGCGA TCTGAAAGAG
AAGATCGACC CGTACCTGCG CCCGATCTAC GACGCGCTCG ACGACATGAT CGCGCCCGAA
AAACTGAAAT TGTACCTGGA AAGCCGGGTG ATCGAAATCG CCCCGCTGGC CTACATGCGC
GGGCGAACGC TGAACAACGC ATTCATTCTG CTCGACGAGG CGCAAAACAC TACGCCGATG
CAGATGAAGA TGTTCCTGAC GCGTATGGGC CCCAGCTCGA AAGCGATCAT CACCGGGGAC
AAATCGCAGA TTGACCTTCC CAAAAACCTC AAATCGGGTC TGATTGACTC GCTGACGGTT
TTGAAGGGCA TTAAAGGGAT CAGCTTCGTG GAACTCGACG GGTCGGATGT TGTAAGGCAC
CGTTTGGTGA AGGACATTCT TGCTGCCTAT GAAAAATCGG AGAAATAG
 
Protein sequence
MLEKIITLED VSMVDFLGIH NSNIKEVAAA FPESKIISRG NEIRIQGTAP EIIRITDVID 
SLLAHYQKYG KITNDNVKGY LNGIAKMPVA TGEDDDDVIL YGNKGLVVKA KTPNQKLLVE
QAAKYDLVFA IGPAGTGKTY TAVAIAVKAL KNKEVRKIII TRPAVEAGEN LGFLPGDLKE
KIDPYLRPIY DALDDMIAPE KLKLYLESRV IEIAPLAYMR GRTLNNAFIL LDEAQNTTPM
QMKMFLTRMG PSSKAIITGD KSQIDLPKNL KSGLIDSLTV LKGIKGISFV ELDGSDVVRH
RLVKDILAAY EKSEK