| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1061 |
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| Symbol | |
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| ID | 8224632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 1258058 |
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| End bp | 1259836 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644928923 |
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| Product | ABC transporter related |
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| Protein accession | YP_003085475 |
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| Protein GI | 255034854 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.809273 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTAT TGATCCAATA CCTGAGCAGG TACAAAGGGC TCATTTTCCT TGCCCTCGTG
ATGGCCGCCA TCAACCAGAT ATTTTCCTTG CTCAATCCCT ACATCCTCGG TAATTACCTC
ATTGACCCCT ACGCCAACAA AGCCGCCGAA TTTCGTTCCA AAGACCTGGG CGACGAGTTT
TTCAAAGGCG TGCTGCTCGG GCTGCTGATG ATCATCGGCG TGGCGATGGT GTCGCGTATT
GCCAAGGCGT TCCAGGATTA CCTGGTAAAT GTGGTGATTC AGAAATTTGG CGCTGCCCTG
TATACGGACG GTCTGCGCCA CGCGCTCCGG CTCCCTTTCC AGGACTTTGA GGATCAGCGC
TCGGGCGAAA CGCTTTCCGT GCTCCTGAAA GTCCGCGCCG ATTGCGAGAA GTTCATTCTT
AATTTCGTTA ACGTGCTGTT TTTCACCTCG GTGGGAATTG TGTTTGTGGT AATCGTCGCA
TTCCGGCTCA GCCCGATGCT GCCGCTGATT TACCTGGTCG GCGCGGTTAT CCTGGCGTTT
TTAACGAGTG TTTTAAGCAG GAAAATCAAA ACGATACAAA AGAATATCGT CAAGGAAACC
ACTGCACTGG CGGGCTCCAC AACTGAATCG CTGCGCAATA TCGAGCTGGT TAAAAGCCTT
GGGCTAACGC AGCAGGAAAT CGGCCGGTTG AACACCACCA CCTACAAAAT CCTGCAACTG
GAACTCAAAA AGGTAAAAAG CATCCGTTCG GTAAGTTTCA TTCAAGGGAC ATTCGTCAAT
TTTCTACAAC AATGCGTGAT GTTCGCATTA CTGTTTTTCG TGTTCCGGGA TAAAATTACC
GTGGGGCAAA TGATGATGAT GCAATTCTAC TCGTTCTTCA TTTTCGGGCC ATTGCAGGAG
CTGGGCAATG TGATACTCTC CTACCGCGAG GCCGAGGCTT CGCTAAACAA CCTGCAAGGG
CTTTTGGCCC GTCCGGTGGA ACACAAACCG GCTGATCCGG CGAGCATTAC CGACATCCGG
GAGTTGCAGT TCGATCACGT GAAGTTCCAG CACCAAACCG CCAAACGTCC CGCTTTAGAA
GACATTTCGT TTAATGTAAA GCGTGGCGAA ACCATCGCAT TCGTAGGACC GTCGGGTTCC
GGAAAAACCA CCCTCGTGAA ATTGCTCGTG GGCCTTTACC AGCCCAACGA CGGCACCGTA
TTCTATAATG GTATCAATGG CAAAGAAATT GATTTTGACG AAATCAGGCA TAAAATCGGC
TTCGTGACGC AGGATACGCA GCTTTTTTCG GGTACGATCA AAGAAAACCT GCTGTTTGTA
AACCCGGAAG CGACCGACGA AATGATCAAC AATGTGCTGC TCAAAGCGGC CTGCTTCAAC
CTCCTCGCAC GCGCCGAGAA CGGCATCGAC ACGGTAATCG GCGAAGGCGG ACTGAAATTA
TCAGGCGGCG AACGGCAGCG CCTTTCCATC GCGCGTGCGC TCCTGCGTAA TCCGCACCTG
ATCATCTTCG ACGAAGCCAC TTCGGCGCTC GATTCCCTCA CGGAAGAGGA AATTTCCAAC
ACGATTCGCG ACATCACCGA CCAGCGTCAG CACATTACCG TCATGATCGC CCACCGCCTG
TCCACCGTCA TGTACGCCGA CCGCATCTAC GTCCTCGAAA AAGGCCGCGT AGTCGAAACC
GGCAACCACC ACGCCTTACT GGAAGAAAAA GGTCTCTACT ACGCCATGTG GCGCCAGCAG
ATTGGCGAAA GGAAGGACGA GACGGTGCTT TCGGCTTAG
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| Protein sequence | MKLLIQYLSR YKGLIFLALV MAAINQIFSL LNPYILGNYL IDPYANKAAE FRSKDLGDEF
FKGVLLGLLM IIGVAMVSRI AKAFQDYLVN VVIQKFGAAL YTDGLRHALR LPFQDFEDQR
SGETLSVLLK VRADCEKFIL NFVNVLFFTS VGIVFVVIVA FRLSPMLPLI YLVGAVILAF
LTSVLSRKIK TIQKNIVKET TALAGSTTES LRNIELVKSL GLTQQEIGRL NTTTYKILQL
ELKKVKSIRS VSFIQGTFVN FLQQCVMFAL LFFVFRDKIT VGQMMMMQFY SFFIFGPLQE
LGNVILSYRE AEASLNNLQG LLARPVEHKP ADPASITDIR ELQFDHVKFQ HQTAKRPALE
DISFNVKRGE TIAFVGPSGS GKTTLVKLLV GLYQPNDGTV FYNGINGKEI DFDEIRHKIG
FVTQDTQLFS GTIKENLLFV NPEATDEMIN NVLLKAACFN LLARAENGID TVIGEGGLKL
SGGERQRLSI ARALLRNPHL IIFDEATSAL DSLTEEEISN TIRDITDQRQ HITVMIAHRL
STVMYADRIY VLEKGRVVET GNHHALLEEK GLYYAMWRQQ IGERKDETVL SA
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