| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1033 |
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| Symbol | |
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| ID | 8224603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 1214005 |
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| End bp | 1214862 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644928894 |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003085447 |
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| Protein GI | 255034826 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3622] Hydroxypyruvate isomerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0514922 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCTG CGGCTGGCCT GGGAACGTTT TCGAGCTCCC TTGCCGAAGC CTTCGCCGCG
TCCCGCGAAG CGCTTGGCCC ACAGTTGAAC GGCAAAATCA ATCATTCCGT ATGCAAATGG
TGTTACAGCA AAATTCCGTT GGAAACCTTT GCGCAGGAAT GCAAGAAAAT CGGCTTGACC
TCCATCGAAT TGCTAGGCCC CGAAGAATGG CCGGTTATCA AAAAATACGG ACTTACCTGC
GCTTTGCCCT GGGGCGAAGG ACTCACACGA AGCATTGACA AAGGTTTTAA CGATCCTAAA
AATCATGAAG AGCTGATCAA GGGTTTTGAA GATGTGATTC CAAAAGTGCG GGCTGCCGGC
TATGACAAGA TCATTTGCTT CTCGGGCAAC CGCCGCGGCA TGTCGGACTA TGACGGGATC
CGCAACTGCG CGGAAGGCAT CCGGAAGCTG ATCCCGACGG CAGAAAAGCA TAATGTAACG
CTGGTGATGG AATTGCTGAA CAGTAAAGTC AACCACAAAG ATTACATGTG CGACCGGACA
GAGTGGGGTG CAGCCCTTTG CGAAGCCGTT GGTTCAGAGA AATTTAAGCT CTTGTACGAC
ATTTACCACA TGCAGATCCA GGAAGGCGAC GTGATCGCGA CCATTAAAAA GTACCACAAG
TACATCGCGC ATTATCACAC GGGCGGTGTG CCGGGCCGAC ACGAGATCGA CGAGACGCAG
GAGCTGTATT ACCCGGCCAT TATGAAGGCA ATTGTAGAAA CCGGTTACAA GGGTTTCGTA
GGGCAGGAGT TCGTCCCAAG CCGGGGTGAC GATCTCGCTT CACTGAAACA AGGTGTCACC
ATTTGCGACA TTGCCTAA
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| Protein sequence | MAAAAGLGTF SSSLAEAFAA SREALGPQLN GKINHSVCKW CYSKIPLETF AQECKKIGLT
SIELLGPEEW PVIKKYGLTC ALPWGEGLTR SIDKGFNDPK NHEELIKGFE DVIPKVRAAG
YDKIICFSGN RRGMSDYDGI RNCAEGIRKL IPTAEKHNVT LVMELLNSKV NHKDYMCDRT
EWGAALCEAV GSEKFKLLYD IYHMQIQEGD VIATIKKYHK YIAHYHTGGV PGRHEIDETQ
ELYYPAIMKA IVETGYKGFV GQEFVPSRGD DLASLKQGVT ICDIA
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