Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_1026 |
Symbol | |
ID | 8224596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 1205131 |
End bp | 1206243 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644928887 |
Product | alanine racemase domain protein |
Protein accession | YP_003085440 |
Protein GI | 255034819 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3616] Predicted amino acid aldolase or racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.129179 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.48219 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTGGT ACCAGCTCAG CAATCCGGAG GAGGTGATCT CTCCCTCGCT CCTTTTTTAT AAAAGCCGCA TCGAAAGCAA CATCCGCAGC ATGGTGAGCC TTGCCGGGTC GAAAGACCGG CTGGTGCCGC ATGTCAAGAC CCATAAATGC CCTGATGTGG TGGCGATGCA TTTGTCTGCC GGCATTACGA AGTTTAAATG CGCGACGATC GCCGAGGCGG AAATGGTGGC GACAGCCGGA GCGCCCTGGG TGCTGATCGC ATACCAGCTC GTCGGCCCGA ATATCAACCG CCTTTTCGCA CTGCGTGAGC AGTTCCCGGA CACGACGTTC GCGTCGCTCA TCGATAGCGA GGAAACGGCC AGCGTGCTGA GCGAAGCCTC CCTGGCGCGC GGCCAGCGCT CTACGGTATT TCTCGACGTA AATAATGGCA TGAACCGCAC CGGGCATGCT ACGGACGAGT CGCTGCTATC GCTTTACCGG TTTGTAAACG GGCTGGAAGG CCTGGCATTC GGCGGCGTGC ACATCTACGA CGGTCATATC CGCAATCCCG AATTTTCCGA TCGCAAGGCG GCGGCCGACG AGGCGTACGA GCGCGTGCTC CCGCTCCTCG ACCGCATCGA AACCGAATGC GGGTACGAGC CGATGATCAT CGTGGGCGGA TCGCCTTCGT TCACAGTCCA TGCCCTGCGG CCCGGCGTTT ATCTCAGCCC GGGCACGAAT GTACTCTGGG ACTGGGGTTA CGGTGATCGC TTCGATGGCC AGCCGTTCGA GCACGCCGCT TTGATCCTCA CCCGGGTCAT TTCCAAACCA GCGGCCGGCG TGATTACTAT CGACCTCGGC CACAAGGCAA TTTCCGCCGA AAACCCGATC GAAAACCGCC TGCGGCTGCT TAACCTCAGC AACTACACGC TGCTCAGCCA AAGCGAAGAG CACGGTGTAT TGGAAGTGAC CAGCGAAGCA TGGGAATCGA TCCGCATCGG CGATGTCTTT TACGCACTAC CCTACCACAT TTGCCCCACC GTAGCCCTAC ACGATTTCGC AACCGTCATC GAAAACGGCA ACGTGACCGG CGAATGGAAA ATCACCGCGC GAAGCAGGCG CATAACTGTT TAA
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Protein sequence | MSWYQLSNPE EVISPSLLFY KSRIESNIRS MVSLAGSKDR LVPHVKTHKC PDVVAMHLSA GITKFKCATI AEAEMVATAG APWVLIAYQL VGPNINRLFA LREQFPDTTF ASLIDSEETA SVLSEASLAR GQRSTVFLDV NNGMNRTGHA TDESLLSLYR FVNGLEGLAF GGVHIYDGHI RNPEFSDRKA AADEAYERVL PLLDRIETEC GYEPMIIVGG SPSFTVHALR PGVYLSPGTN VLWDWGYGDR FDGQPFEHAA LILTRVISKP AAGVITIDLG HKAISAENPI ENRLRLLNLS NYTLLSQSEE HGVLEVTSEA WESIRIGDVF YALPYHICPT VALHDFATVI ENGNVTGEWK ITARSRRITV
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