Gene Dfer_1026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1026 
Symbol 
ID8224596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1205131 
End bp1206243 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content59% 
IMG OID644928887 
Productalanine racemase domain protein 
Protein accessionYP_003085440 
Protein GI255034819 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3616] Predicted amino acid aldolase or racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.129179 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.48219 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTGGT ACCAGCTCAG CAATCCGGAG GAGGTGATCT CTCCCTCGCT CCTTTTTTAT 
AAAAGCCGCA TCGAAAGCAA CATCCGCAGC ATGGTGAGCC TTGCCGGGTC GAAAGACCGG
CTGGTGCCGC ATGTCAAGAC CCATAAATGC CCTGATGTGG TGGCGATGCA TTTGTCTGCC
GGCATTACGA AGTTTAAATG CGCGACGATC GCCGAGGCGG AAATGGTGGC GACAGCCGGA
GCGCCCTGGG TGCTGATCGC ATACCAGCTC GTCGGCCCGA ATATCAACCG CCTTTTCGCA
CTGCGTGAGC AGTTCCCGGA CACGACGTTC GCGTCGCTCA TCGATAGCGA GGAAACGGCC
AGCGTGCTGA GCGAAGCCTC CCTGGCGCGC GGCCAGCGCT CTACGGTATT TCTCGACGTA
AATAATGGCA TGAACCGCAC CGGGCATGCT ACGGACGAGT CGCTGCTATC GCTTTACCGG
TTTGTAAACG GGCTGGAAGG CCTGGCATTC GGCGGCGTGC ACATCTACGA CGGTCATATC
CGCAATCCCG AATTTTCCGA TCGCAAGGCG GCGGCCGACG AGGCGTACGA GCGCGTGCTC
CCGCTCCTCG ACCGCATCGA AACCGAATGC GGGTACGAGC CGATGATCAT CGTGGGCGGA
TCGCCTTCGT TCACAGTCCA TGCCCTGCGG CCCGGCGTTT ATCTCAGCCC GGGCACGAAT
GTACTCTGGG ACTGGGGTTA CGGTGATCGC TTCGATGGCC AGCCGTTCGA GCACGCCGCT
TTGATCCTCA CCCGGGTCAT TTCCAAACCA GCGGCCGGCG TGATTACTAT CGACCTCGGC
CACAAGGCAA TTTCCGCCGA AAACCCGATC GAAAACCGCC TGCGGCTGCT TAACCTCAGC
AACTACACGC TGCTCAGCCA AAGCGAAGAG CACGGTGTAT TGGAAGTGAC CAGCGAAGCA
TGGGAATCGA TCCGCATCGG CGATGTCTTT TACGCACTAC CCTACCACAT TTGCCCCACC
GTAGCCCTAC ACGATTTCGC AACCGTCATC GAAAACGGCA ACGTGACCGG CGAATGGAAA
ATCACCGCGC GAAGCAGGCG CATAACTGTT TAA
 
Protein sequence
MSWYQLSNPE EVISPSLLFY KSRIESNIRS MVSLAGSKDR LVPHVKTHKC PDVVAMHLSA 
GITKFKCATI AEAEMVATAG APWVLIAYQL VGPNINRLFA LREQFPDTTF ASLIDSEETA
SVLSEASLAR GQRSTVFLDV NNGMNRTGHA TDESLLSLYR FVNGLEGLAF GGVHIYDGHI
RNPEFSDRKA AADEAYERVL PLLDRIETEC GYEPMIIVGG SPSFTVHALR PGVYLSPGTN
VLWDWGYGDR FDGQPFEHAA LILTRVISKP AAGVITIDLG HKAISAENPI ENRLRLLNLS
NYTLLSQSEE HGVLEVTSEA WESIRIGDVF YALPYHICPT VALHDFATVI ENGNVTGEWK
ITARSRRITV