Gene Dfer_1019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1019 
Symbol 
ID8224589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1198131 
End bp1198481 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content49% 
IMG OID644928880 
Producttranscriptional regulator, HxlR family 
Protein accessionYP_003085433 
Protein GI255034812 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.126955 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.402464 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAAGA CAGCGGAAAT CAGAAACCAG GCCGAAGAAG TAAAGGCTCT TCAAGACACC 
ATTTACGTGA TCGGCGGCAA ATGGAAGTTG CCCATTATCA ATTCGATATG CAATGGAAAC
AAGCGTTTCC GGGAAATCGA ACGAAGCATC CCGGGCATCA CCACCCGCAT GCTTTCAAGG
GAATTGAAGG AAATGGAAAT GAACAAGCTC ATCAAACGCA CCGTCTACCC CGACTCCCCG
GTGCTGGTCG AATACGAATC CACACCCTAC TGCAAAACAT TCGGAAACAT CATCCTCGCT
ATGATCGAAT GGGGCAAGGA GCATAAGAAG CATATTACGC AGGCGGACTA G
 
Protein sequence
MQKTAEIRNQ AEEVKALQDT IYVIGGKWKL PIINSICNGN KRFREIERSI PGITTRMLSR 
ELKEMEMNKL IKRTVYPDSP VLVEYESTPY CKTFGNIILA MIEWGKEHKK HITQAD