| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1010 |
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| Symbol | |
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| ID | 8224580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 1185192 |
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| End bp | 1186433 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644928871 |
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| Product | Mandelate racemase/muconate lactonizing protein |
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| Protein accession | YP_003085424 |
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| Protein GI | 255034803 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.425395 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACGAA GAAATTTTAT TAAAACTGCC TTCCTGGGCA CCACAGCGCT TGCGACCGGC
TTTCCGTTTG CGGATTCCGG CGCGGCTTCG AAGATGAAGA TTACGAAAAT CCGGTACTAT
GCGGCGCCGG GTTATAACAA ACCGCTCTTT AATCAGGCGC GGGGCATTGT GGAGATCGAA
ACCGATGGCG GCATTATCGG CATTGGCGAG GGAGGCTCGA AGGATATGAT CGAACAATGC
GCACAAATGA TGATCGGCGA AGATCCGTTC CGCATCGAGC ACATCTGGCA GAATGTCTAC
CGCGGTATGT TCTACCCGCC GGGCCGCGAA AAGCTGCATG CATTGGGCGC GCTCGAAATG
GCGCTTTGGG ACATTAAGGG TAAGGCATTG AATGTGCCGG TATACGAGCT GCTCGGTGGT
GCTACGCGCG ATTATGTGGA ATGCTACGCG ACGGGTTTCC GGGCATCGAA GGCCAAGACC
GAGGAGGAGC GCGCCAGGGA TTGCATCGAA GCCGGACTGC GCTCGTACCG CATTGGCCCC
ACAGGCGGCA ACGGCGACCA GCCATTCGAT TTTTATGAAA ACGTCAAAAA AACGATCGAT
TTCTGCAAAC GTATCGACGA GGCCGTTGGC GGAGGCGGGA AATGGGCCAT TGACCTCCAC
ACCCGGTTCG ATATGACCGA CGGCCTTAAG ATCTGCAACG CGCTCGAATC CCTCGAACCG
TATTTCGTGG AGGACATTAT CCGCTCGGAA AACCCCTCGG TGTACAAAAC GGTGCGCGCG
ATGACCAAAG TGCCCATTGC CGTGGGTGAG CAATTCGGCG ACCGCTGGGA CAGCAATGAG
TTCATCGAAA ACCGCTGGAT CGACTACACC CGTTTCACAT TGCCGAACAC GGGCGGGATC
AGCGAATTTA AAAAGCTGGC TTCGATGTGC GAAACGCATT ATGTGGGCAT GATACCGCAT
TTCACGGGGC CGTTGTCCAC GGCTACATTG GTACACGTGC TCGGATCGAG CAGCCCGGCG
CGGGCGCTGA TGGAGCTGGG CGGCGGTGAG CCGGAGCGTC CTGCTTACTT CAATGAGGAT
TATATCAATT TCAAAAACGG CAAGCTGTAT CTCAACGACG CGCCCGGACT GGGGGTAAAA
TTCGATCCGA AAAAGGCGAC TTTCATCATG GAAGTGAAAG AAAAAACCAA GTTCCCGCAC
CCGATCCTGA AAAATCCGGA CGGCTCAATC CACAACTGGT AA
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| Protein sequence | MQRRNFIKTA FLGTTALATG FPFADSGAAS KMKITKIRYY AAPGYNKPLF NQARGIVEIE
TDGGIIGIGE GGSKDMIEQC AQMMIGEDPF RIEHIWQNVY RGMFYPPGRE KLHALGALEM
ALWDIKGKAL NVPVYELLGG ATRDYVECYA TGFRASKAKT EEERARDCIE AGLRSYRIGP
TGGNGDQPFD FYENVKKTID FCKRIDEAVG GGGKWAIDLH TRFDMTDGLK ICNALESLEP
YFVEDIIRSE NPSVYKTVRA MTKVPIAVGE QFGDRWDSNE FIENRWIDYT RFTLPNTGGI
SEFKKLASMC ETHYVGMIPH FTGPLSTATL VHVLGSSSPA RALMELGGGE PERPAYFNED
YINFKNGKLY LNDAPGLGVK FDPKKATFIM EVKEKTKFPH PILKNPDGSI HNW
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