| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1000 |
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| Symbol | |
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| ID | 8224570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 1169159 |
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| End bp | 1170505 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644928861 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_003085414 |
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| Protein GI | 255034793 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.495217 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0302884 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCGGC ATTGGCAGTA CCTTCTTGTG CCTTTGCTGA GCCTCGCCGC GCCCGTTCTG
GCGCAGGACA CACGCCTGCA AGGCTACGTG GATCAGGGCT TGCGGAACAA CCAGGGGCTT
AAACAACAGC GCTTTATCCT CGAAAGGAAC CTCTTCGCGC TCAAAGAAGC TCGCACGTTC
TTTTATCCAG AGGTCAATTT CAGCACGTCA TACCTCGACT CGCGCGGCGG CCGGAAAATC
AGCATCCCGA TCGGCGATCT GCTGAACCCG GTGTACAGCT CTCTGAACGA GCTCACTAAT
TCTTCGGCGT TCCCTAAGGT CGAGAATGTG AGCCAGACGT TTAACCCGCG CAATTATTAC
GATGCCCGGT TCCGGACTTC ATTACCGCTC TACAATGCGG AAATCAACTA CAACACCAAA
ATCCGGAAAG AGCAGATCCA TTTGCAGCAG GCGGAGGTGG ACGTTTACAG ACGCGAGTTA
GTGAAGGAGA TCAAAGTGGC GTACTATGCC TGCCAGCAGG CAGATGAGGC GATACACATT
CTGGAAAACG CTGTTACGCT GGCCCGCGAG AATTTGCGGT TCAACCAGGC GCTCGTCAAG
AACGATAAGG CGATAAGGAC GGTGATCAGC CGGTCGGAAA ACGAATTGAT CGGCTTGGAG
GCCCGGCTGG TGGACGCGCG TAACCAGTCG GTGAATGCCC GGGCGTATTT CAATTTTTTA
CTGAACAGCC CTTTGGAAAA CACGCTTGAA ATCGAGCAAC CGGACGAATC GGGTGTGTTG
ACCGACACGA TCGCGGCGGG TAGGAGGGAG GAACTGGCGA AGCTGGAATC GTTGTCGCGG
CTCAATGCAT TGTCGGGCCA GCTGGCGCGG GCGGGCGCAT TGCCAAAACT GTCGACGTTC
ATTGACCTCG GTTCGCAGGG TGATTTTGTG AGTTTCAACC GCGATACACG ATATTATCTT
TTCGGTGTAA CGCTCGACTG GCGGGTGTTT GCCCACAACC GCACGCAATA CAAAGTGAAA
CAGGCCGAGC TGGAACAAAA AGCGACCGGC GAGCAGATCA GTCAGGTAGA ACAACAACTG
CAATTGCAGA GCAAAACGGC TGCTAATAGC TTTCAATCGG CGGTGCTCAC TTATCGTGCA
GCCAAAAGCC AAACCGCACT TTCACAGCAA TATTACCAGG ACCAGCAAAA GCTCTACCGC
GAAGGCCAGC TGCTGTACAT TGAACTGCTC GATGCGCAAA ACCGGCTCAT CGCCGACCAG
CTGCAACAAA GTATTTCCTA TCTCAACGTC CAGACCCGCG CCGCTGAGTT GGAGCGCGCG
AAGGCGAGTT ATTTATTCAC AAACTGA
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| Protein sequence | MPRHWQYLLV PLLSLAAPVL AQDTRLQGYV DQGLRNNQGL KQQRFILERN LFALKEARTF
FYPEVNFSTS YLDSRGGRKI SIPIGDLLNP VYSSLNELTN SSAFPKVENV SQTFNPRNYY
DARFRTSLPL YNAEINYNTK IRKEQIHLQQ AEVDVYRREL VKEIKVAYYA CQQADEAIHI
LENAVTLARE NLRFNQALVK NDKAIRTVIS RSENELIGLE ARLVDARNQS VNARAYFNFL
LNSPLENTLE IEQPDESGVL TDTIAAGRRE ELAKLESLSR LNALSGQLAR AGALPKLSTF
IDLGSQGDFV SFNRDTRYYL FGVTLDWRVF AHNRTQYKVK QAELEQKATG EQISQVEQQL
QLQSKTAANS FQSAVLTYRA AKSQTALSQQ YYQDQQKLYR EGQLLYIELL DAQNRLIADQ
LQQSISYLNV QTRAAELERA KASYLFTN
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