Gene Dfer_0987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0987 
Symbol 
ID8224557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1150841 
End bp1151713 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content59% 
IMG OID644928848 
ProductNmrA family protein 
Protein accessionYP_003085401 
Protein GI255034780 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAATA TCATTTTAGG CGCATCGGGC CGCGTCGGAT CGGCGGTTGT TGCGAGGCTC 
GTCGAAAAGC AGGCGCCGGT GAAAGGGATT GTGAGAAATG CGGAGAAGGC GGAGGCATTA
CAAGCGACGG GCGCCGACGC CGCCATCGCC GACGCACATA ACCTGCCCGC GCTGAAAGTA
GCCCTGCGTG ACGGCGAGGC ACTTTTTGCG CTCACACCGG AAACCGGGCA GGAGGAAAAC
GTGCTCGGCG ATACCAACGA CGTACTCACC AACTACCGCG CGGCGCTCGC CGCGGCCAAC
ATCCGCAAGC TCGTGGGACT ATCGTCCATG GGCGCGCAGC ACCGTGAAGG GACCGGCAAC
CTGGTCATGT CCTACATGCT CGAACACGCT TTCGACGGGC TGGACCTTAC GCGTGTATTC
ATCCGGCCGG CCTACTATTT CAGCAATTGG CTCGGTTACC TCGAATCGGC CGGGGAAACG
GGCGTGCTGC CCACATTCTT CCCGACCGAC CTCAAAATCC CAATGATCTG CCCGTCCGAC
GTGGGCCATT TCGCGGCGGA TGTGTTGCTG AACGACGACC GCGACCGGAC TATTTACGAA
GTCAGCGGCC CGGCATCATA CAGTTCGGAT GATGTTGCAG AGGCATTCGA AGAGGTTTTA
GGTAAAAAGG TGAAAGCGCA GCAAATACCC AGGGACCAAT GGGCCGGCAC CTTGCAGTCC
ATCGGCTTTT CCAAAGACGG CATCCGGAAT TTTATCGAAA TGACCGACGC CGTGATCAGC
GGAAAGGCAG GTCCGCAAGG CAACGGCACC ATCACCGCCG AAATGGGCAC CACGTTGGAA
GCCTATCTCG AACAGGCATT GAAAAGCGCA TAA
 
Protein sequence
MANIILGASG RVGSAVVARL VEKQAPVKGI VRNAEKAEAL QATGADAAIA DAHNLPALKV 
ALRDGEALFA LTPETGQEEN VLGDTNDVLT NYRAALAAAN IRKLVGLSSM GAQHREGTGN
LVMSYMLEHA FDGLDLTRVF IRPAYYFSNW LGYLESAGET GVLPTFFPTD LKIPMICPSD
VGHFAADVLL NDDRDRTIYE VSGPASYSSD DVAEAFEEVL GKKVKAQQIP RDQWAGTLQS
IGFSKDGIRN FIEMTDAVIS GKAGPQGNGT ITAEMGTTLE AYLEQALKSA