Gene Dfer_0962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0962 
Symbol 
ID8224531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1117021 
End bp1118310 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content43% 
IMG OID644928823 
Productprotein of unknown function DUF1508 
Protein accessionYP_003085377 
Protein GI255034756 
COG category[S] Function unknown 
COG ID[COG3422] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00273336 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000637648 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGAACGT TTGTAATATC TAAGCGGGCT AACGGAGAAT TTCAATTTAA CTTGAAAGCC 
GGCAATGGTC AAGTGATATT GGCAAGTGAG GGCTACACGA CTATGGCGGC GTGTGAGAAT
GGTATAGAGT CAGTTCGTGT CAATTCGTTA GAAGATTCTC AATTCGATCG CCTGACTTCG
AAAAATAATA AATATTACTT TCTATTGAGA GCCCGTAACG GGCAGGCCAT AGGAAGTTCT
GAGATGTACG AATCGGCTGC AAGCAGAGAT AACGGCATAG AGTCGGTGAA GAAAAATGCT
TTTGGTGCGA CTTTACAAAT TGTACCGAAC ACAATTGCAA CGGAATCGCA GGCAGACTCA
GGAAAGCCCA ATTCGGAGGA ATCCAGGCAT GTACAGGTGG GAATAGGGCT CCAGAATGAA
CTTGCCTATG AAAGTTTTCA GAGGTTTCTC AACGAATATA AAATCTCAGA ACGTCTGCTT
GAGATTGCAC TGAAAGAAAA GGAGTTTAGG GCTAGCGCTG CTCAGCCGGA AACTAGTGAA
AACCTTCCAG ATCTATCAGC TGATCTTCAG GAGATTAAGA ATCTTGTAGG ATTGGTTAGC
GTAGAACAAC GACTACCGTC TAAGGCCCTG AGCGAGTTGA AAACCAATAA ATTGTTTCAA
GAAGCGTTTG CAAATAATTC AGAAATGAAG GCTGTGGTTG TTTCGATAGA CATTCGAAAG
TCAACGGAAT TAATGCTCAA ATCGAGAAGT CCCAGGCAAT ACGCTGAGTT TATTACCAAA
TTGTCGAGTG AGCTATCGAA TGTGATAACT TCAAACTTTG GCATTTACGA CAAATTTACG
GGAGATGGTA TTTTGGCTTT TTTTCCAGAT TTTTATTCTG GAAAGGACTC GATTCTGCAT
GCACTTAGAG CATGTGATGA GTGCCACGCA GTGTTTCGAG AGCACTATGA GAAGTACAAA
AGCATTTTTA CTGTTTTTCT AAAAAGCATT GGTTTGGGGA TAGGGATTGA TTATGGCGAG
GTGACATTGG TTAATAGAGG GGCGGAGTTG ACGGTAGTGG GAATCCCTGT TGTATATGCT
TGCCGAATGT CGTCGGCACC GCCAAATGCG ACCTGGTTAA ATCTGCCGGC TTTTGATTTT
CTGATAGAAA ATTGCGGGAA TATGGTCCAT TACGAGGAGG TGGAAGTCAA TTTAAAGCAT
GAGGGGCCAG CACTTGCATA TGCAATACAG TTCAGCAAAA ACATGGACAA GGTGTTGACA
TTGCCGGAAT GGGCTTTATC CAAAGAGTGA
 
Protein sequence
MGTFVISKRA NGEFQFNLKA GNGQVILASE GYTTMAACEN GIESVRVNSL EDSQFDRLTS 
KNNKYYFLLR ARNGQAIGSS EMYESAASRD NGIESVKKNA FGATLQIVPN TIATESQADS
GKPNSEESRH VQVGIGLQNE LAYESFQRFL NEYKISERLL EIALKEKEFR ASAAQPETSE
NLPDLSADLQ EIKNLVGLVS VEQRLPSKAL SELKTNKLFQ EAFANNSEMK AVVVSIDIRK
STELMLKSRS PRQYAEFITK LSSELSNVIT SNFGIYDKFT GDGILAFFPD FYSGKDSILH
ALRACDECHA VFREHYEKYK SIFTVFLKSI GLGIGIDYGE VTLVNRGAEL TVVGIPVVYA
CRMSSAPPNA TWLNLPAFDF LIENCGNMVH YEEVEVNLKH EGPALAYAIQ FSKNMDKVLT
LPEWALSKE