Gene Dfer_0926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0926 
Symbol 
ID8224495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1081197 
End bp1081883 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content45% 
IMG OID644928790 
Productflavin reductase domain protein FMN-binding 
Protein accessionYP_003085344 
Protein GI255034723 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.332625 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0485806 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTGTT TTGTAAAAAA ACACAAACAT ATGCATCAGG TAAGCAATCC TTCCATATTG 
TATTTTGGTA CGCCCGTTGT TTTGGTTGGA ACCACCAATA GCGACAACAC ATTTAATCTA
GCGCCCATTT CATCGGCATT TTGGCTCGGT TACCGATGCA TGATCGGTAT TGCGGCACAT
TCCAAAACAA CAGAAAATAT CCTCAGAACT CGCGAGTGTG TATTGAATTT GCCGTCTGTC
AATCAGGCAG AAGCGGTTGA CAAACTCGCA CTTTTGACGG GAAGCAATCC AGTACCCGCC
GGAAAGGTTG CGAAAGGGTA TGTACATGAG CCAGACAAAT TTTCCAGGGC TAAGCTCACA
CCAGGTGAGT CTGAAATAGT AAAAGCACCA CGCGTTTTGG AATGTCCGGT CCATCTCGAA
GCACAATTTG TGGGAATCCA TCCTTTTGCA GCTGAAACGG GAATTGAAAA CATCCGAAGC
GTAACAATGG AGTTGAAAAT TGTCCGCGTG CATTTAGACG ACTCCATACT TTCTGACCAG
AATCGTGACC ATGTTGATCC TGAAAAGTGG AAGCCACTGA TTATGAGTTT TCAGCAATTT
TATGGACTTG GCTCTCGGGT ACACTCTTCA AAACTCGCAT CTGTCCCTCA GAAATTGTAC
AGGACGCCGG ATACTGAGCG GGCGTAA
 
Protein sequence
MKCFVKKHKH MHQVSNPSIL YFGTPVVLVG TTNSDNTFNL APISSAFWLG YRCMIGIAAH 
SKTTENILRT RECVLNLPSV NQAEAVDKLA LLTGSNPVPA GKVAKGYVHE PDKFSRAKLT
PGESEIVKAP RVLECPVHLE AQFVGIHPFA AETGIENIRS VTMELKIVRV HLDDSILSDQ
NRDHVDPEKW KPLIMSFQQF YGLGSRVHSS KLASVPQKLY RTPDTERA