Gene Dfer_0898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0898 
Symbol 
ID8224467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1056769 
End bp1057869 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content48% 
IMG OID644928762 
ProductLinoleoyl-CoA desaturase 
Protein accessionYP_003085316 
Protein GI255034695 
COG category[I] Lipid transport and metabolism 
COG ID[COG3239] Fatty acid desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.215198 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAGA TCAGATTTGC CTCCCCCCAT AAAAGCCAGT TTTTCCCTAC ACTTAAAAAG 
CGGGTTGACG CCTATTTCAC CGAAAACGAT AAGACCCGGT ACGCCAACAA AACCATGGTT
GTCAAAACCG TGGTGCTGCT TTCAGCCTAC ATTCTGCCTT TTTTCGCCAT TTTGATCTTC
ACGCCGCCAT TCTGGGTCAG TATGCTGTTA TGGCTGGTGA TGGGCGCGGG CATTTCCGGC
ATTGGAATGA GTATCATGCA CGATGCTAAC CATGGCGCAT TTTCAAATAA TCCGGTGGTG
AATAAATGGC TGGGGTATAC CATTAACCTG GCGGGTGCCG GTGTAACAAA CTGGAAATTA
CAGCACAATA TCCTGCACCA TACCTATACA AACGTCGCCA ATCTGGACGA AGACATCAAA
GACCGCGGCG TGATCAAACT TTCGCCGCAT GAAAAGACAG GGCCGCTGCA CCGCTTTCAA
TGGCTGTATG CATTTTTCTT TTATGGCATC CTTACCTTGT ATTGGGTGTT GTTAAAAGAT
TTTATCCAGT ATGTTCATTT TATCAAGTCG GGCGTAAACC GTCAGACCAG GGCTGAGAAC
ACCGAAATGC TGCTGGGGTT GATCCTGATG AAAGTCATTT ATCTGAGTAT CTTTTTTGCC
ATCCCGGTTT TTGTTTTTCA TTTGCCCTTT TTAGAAATAC TGGCGGGTTT TTTACTCATG
CATTTTGCTG CCGGACTGGT GCTGACGGTT ATATTCCAGC TGGCACATTC AGTAGAAGGT
ACTGAGCACC CGCTGCCCAA CGATGCGGGG GTTATAGAAA AAGATTGGGC AATCCACCAG
CTGGAAACGA CCGTCAACTT CTCGCCCCGC AACAAATGGC TGAGCTGGTA CATCGGCGGA
CTGAATTTTC AGATTGAACA CCACCTGTTC CCCAAAATCT GCCACGTGCA TTATCCCAGG
ATCGCCCCGA TTGTAAAAAA AACGGCGGCC GAATTCGGGC TGACCTATCT TGAAAACAAA
TCATTTGCTT CCGCACTTAG ATCGCACATC GCAAGTCTCA AACGCTTTGG CGCGCCGAGC
TTCAATGAGG CGATCGTCTG A
 
Protein sequence
MEKIRFASPH KSQFFPTLKK RVDAYFTEND KTRYANKTMV VKTVVLLSAY ILPFFAILIF 
TPPFWVSMLL WLVMGAGISG IGMSIMHDAN HGAFSNNPVV NKWLGYTINL AGAGVTNWKL
QHNILHHTYT NVANLDEDIK DRGVIKLSPH EKTGPLHRFQ WLYAFFFYGI LTLYWVLLKD
FIQYVHFIKS GVNRQTRAEN TEMLLGLILM KVIYLSIFFA IPVFVFHLPF LEILAGFLLM
HFAAGLVLTV IFQLAHSVEG TEHPLPNDAG VIEKDWAIHQ LETTVNFSPR NKWLSWYIGG
LNFQIEHHLF PKICHVHYPR IAPIVKKTAA EFGLTYLENK SFASALRSHI ASLKRFGAPS
FNEAIV