| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0824 |
|---|
| Symbol | |
|---|
| ID | 8224393 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 983383 |
|---|
| End bp | 983967 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 644928695 |
|---|
| Product | bifunctional deaminase-reductase domain protein |
|---|
| Protein accession | YP_003085249 |
|---|
| Protein GI | 255034628 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0262] Dihydrofolate reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.308589 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAAGT TAAAATTGCA GGTGCAGATG TCTATCGATG GTTTTATATC GGGACCAAAT
GGCGAAATGG ACTGGTTAGT TTTTGACTGG TCAGAGGACG TAAAAAAATA TGTCGAAGAG
ATTACTAAAC CCGTAGACAC TATTTTACTG GGAAGAAATC TCGCGACCGG ATTTATTCCA
CATTGGGCTG CTGTGGCGGA GGATGACAAA AACCCGGAAC AAGACGCGGG CATTGTTTAT
TCGGAGACTC ACAAAATAGT GTTTAGTAAA ACGCTCCTCA AATCAGAGTG GAACAATACA
ACCGTTGAAA ACGGCAATCT GGTTGAGACA ATAACCGAAA TTAAACAAAG CACTGGTGGC
GATATCATAG TGTATGGTGG TGCTACGTTT GTTTCGGCCC TAATTAAGGA AGGACTAGTT
GACGAACTAC ATTTATTTAT CAATCCTTCC ATTCTGGGAA AAGGCATGCC CATTTTTAAT
ACGATTGATA CTGTGCATAA ACTGCATCCA ATCTGTTGTA AGCATTTCGA ATGTGGAATA
ATATTGACCG TTTACAAATC ACAATCGTTG CAGGATCAAC GTTGA
|
|---|
| Protein sequence | MRKLKLQVQM SIDGFISGPN GEMDWLVFDW SEDVKKYVEE ITKPVDTILL GRNLATGFIP
HWAAVAEDDK NPEQDAGIVY SETHKIVFSK TLLKSEWNNT TVENGNLVET ITEIKQSTGG
DIIVYGGATF VSALIKEGLV DELHLFINPS ILGKGMPIFN TIDTVHKLHP ICCKHFECGI
ILTVYKSQSL QDQR
|
|---|
| |