| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0821 |
|---|
| Symbol | |
|---|
| ID | 8224390 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 975998 |
|---|
| End bp | 979165 |
|---|
| Gene Length | 3168 bp |
|---|
| Protein Length | 1055 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644928692 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003085246 |
|---|
| Protein GI | 255034625 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.661621 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.324111 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATTCAA CTATCCGTTC CTCAAAGAAT GAAAAACTGT TCTTTGTCTT CCCTCGAACC
GCCCTCTGCC GGGCGATTTT TTTGTTTCTA AGCACATTTT CAATCATTGC ATCCGCCCAG
GCGAAGATCT GGTATGTGAC CTATTCGGGG GGAGCTACTA CGAAGGATGG GCGCAGCTGG
GGCACCGCCT ATAACACGCT GCAGTCCACT ATCGACCAAA GCGAAGCTGG CGATCAGATT
TGGGTCGCCG GAGGCACCTA CTATCCGGAA TTTTCATCGG CGGGACTGAG CTTAAAAGAA
GGTGTAAAGG TCTATGGTGG TTTTTCGGGA ACCGAAGCGA ATCTGACTGA TCGAAACTTA
AAACTGACCC AGAACAAAAG TGTGATTACT GGCGGTCGCC TACATTCTTA CACCATTAAC
AATGACCACA CGGAGGCGGA CGGCCTGACA AGAGCTACGT TACTGGATGG CTTTACGGTT
ATAGGAGGCA TATTGGGCGG TATGCGCAAC TATCACTCTT CGCCCACCTT GTCGAATCTG
TTCTTTAAAG AAAATGGTGC CTCCAATTCT CTTGGTGCGG TAATCATTGT GGATAGCTCA
CCCTTGTTCG TAAATGTGAT CATAACAGGC AATCAGGGGG CCGCTGCGCT GTCCAACAGC
GGATCTGCGC CGGTCCTGGT CAACTGCGCT ATTGTCGATA ATACAGTCGA AGCCGCAGTT
TTAATTAATT CAAATTCTGC TCCTGTGCTG CTCAATTGCA CAATTGCCAC TAAAAAAACC
CAGGCCAAGG CGGTTGGCAT CGGCAATATG TTGAATTCCG TACCCAAAAT CCGAAACAGT
ATCATTTCAG CGGTAATTGC CGACATACGA AGCCACGAGT CGAGTTCTGC GGACATCAGG
GACAGCCAGT TATTCACAGA CTTTACCGAA GGTCCCTCAG GATTAATCCC CACTAAAAAC
GACCCGTTTT TTGAAAACCC TGCGTCGGGA AATTACAGAT TACAGAAATG CAGTCCGGCT
GTGAACATGG GCAGCAACAT TTACTATGCC AGCGGCCAGA ACCCCGACAT ATCTGGTATC
TCGACGGACC TGGATGGAAA CACCCGGTTT TTTGACGGCG GAAATGCGGA TCTGGGGGCG
TACGAATACC AGGCACTGCG CGAGCCGGCT GTAACGGGAG TCCTGTTCAT CAAGCCGGGC
GGAACGGGCT CGGGAATAAC CTGGGAATGT GCAGCAGGAA ATCCGCAAGA CGCTATCGAT
AGGTCCTTAG CCGGACAACA GGTGTGGGTT GCCGGCGGCC AGTACTTGCT TGACAAGGAC
CATCCGCTTG TGATGAAGGA AGGCGTGAAA ATCTATGGGG GCTTTGCCGG AACTGAAACA
AGCCTTGGTG AGCGCGATCT CTCTGTTAAA GTCAATAATA GCATACTCCG TGGGAGTGGC
CAGTTAGTTG TTGCCAACAG CGATGCTGGA ATTACCCCGT CTGCTGTCCT GGATGGTTTT
ACAATTACAG GAGGTATGAA CGGGATTTCC AATTCCCAGT CCTCCCCGAC GCTTTCCAAT
CTGTTGATCA CCGGTAACCC GCTAAATGGT GCATTTATGG CAGGTGGGAT AATGAACTAC
GAATCTAATG CAATCACCAC CAACTGCGCT ATTGTCGGCA ACCAAGGTTC TGGTACAGTG
GTGGGTATCG TCAATATGTC ATCGTCTCCC GTCATCACCA ATTGTACGAT TACCGGGAAT
ACAACGACGG GTCCTGGGAG CGTGGGAATA GCGAATTTAG GCAATTCCGG TCCCAAAATT
CGTAACTGCA TCATTTACGG CAACCAGCTG GGTGTTTTCA GCGAGCCATC TTCGAGCCCG
ACCATTGAGT ACAGCCTTGT AGACCCAAAT CCGCCTACTG ATCCCAACGC TCCTCAGCCG
CCCGGGATTG ATCCGCTTTT TGTAAATGCC GCCGCGGGCA ACTACCGCTT GCAGCCGTGC
AGCCCGGGCG TCAACACGGG ATTCAATTAC TTCCAGGCCG GGCTTACGCC TGACCTGTCA
GGTCTTAACA CCGATCTGGA GAGTAAACCA AGGATACGGG AGCACATGAC AGATATGGGC
GCCTATGAAT TTGGAGGCGA AACCCGTGAA CTGGCCAGTG ACCTCGACGA AGCCTCCGCG
ACCATCGATA GGGACAAGGT GCTGACTTCC TTTGACTCCA ACTGCAGGTT AGTAGCCTAT
CTCTTGCCCA ATGGTCCGGC ACCGGTTAAG GGCTATGTCA GTGCCAAAGT GTGGGTAGCC
AGTTCCCAGC CGGCGAATTT TGTGAAAAGG CACTATCAGA TCTCACCAGG AATCGACACC
CAGCAGGCTA CGGCACGGGT TACACTTTAT TTTACCCAAC AGGAATTCAC CGATTTCAAT
GAGGTGAACG AGATCAAGCT GCCGCTCGAT GCGGCAGATG TAGAGAATCA CAAGGCAAAT
CTGTGGATTG AAAAACGTCC CGGATTCAGC ATTGACGGAT CTGGTCTGCC CAACTCTTAC
ATTGGCGACG TAGTTTCTTT CAAGCCTTCA GAAGCAAATG GAAAGATAGA ATGGAACGCC
GATGCGCGGC ACTGGGAAGT GAGCTTTGAC GTAACCGGTT TCAGCGGATT TTTTGTAAAA
ACGCGCCAGT CGACATTGCC GCTCAACCTG GTTTCCTTTA CCGCTACCAA AGAAGCAGGA
AGCAATGTGC TGCAATGGAG CACGGCCAGC GAAATCAATA CGGATCAATT CGAGATCCAG
CGCAGCAGCA ATGCGCGGAC CTTTGTGGGC GTAGCGACGG TCGAAGCAGC CGGCAGTGGC
AGTTCTCAAT ATAGTTATCA CGATCGCACC GGCCATGACC GCACGAGTTA CTACCGGCTG
AAAATGTCGG ACCTCGACGG GACATTTTCG TACAGCAAGA TCATTTCACT CGCGGCCCAC
GGAGACGGGG CAGGCATTTA CCCCAATCTT GCGAGAGCAT CGATAACCTT CCAGGCAAGC
GACGCATTGC TGCAAACAAC CGCACATTTG TACGACATCA TGGGCCATCG CGTGCAATCG
ATTACTGTTA CGAGCAACCG ACAGCAGCTC GATACAGAGC AATTGATTAG CGGGCTGTAT
ATTTTGAAAT TCGCCGACGG TACTGTGCAG CGGTTTGTGA AGGAGTGA
|
|---|
| Protein sequence | MHSTIRSSKN EKLFFVFPRT ALCRAIFLFL STFSIIASAQ AKIWYVTYSG GATTKDGRSW
GTAYNTLQST IDQSEAGDQI WVAGGTYYPE FSSAGLSLKE GVKVYGGFSG TEANLTDRNL
KLTQNKSVIT GGRLHSYTIN NDHTEADGLT RATLLDGFTV IGGILGGMRN YHSSPTLSNL
FFKENGASNS LGAVIIVDSS PLFVNVIITG NQGAAALSNS GSAPVLVNCA IVDNTVEAAV
LINSNSAPVL LNCTIATKKT QAKAVGIGNM LNSVPKIRNS IISAVIADIR SHESSSADIR
DSQLFTDFTE GPSGLIPTKN DPFFENPASG NYRLQKCSPA VNMGSNIYYA SGQNPDISGI
STDLDGNTRF FDGGNADLGA YEYQALREPA VTGVLFIKPG GTGSGITWEC AAGNPQDAID
RSLAGQQVWV AGGQYLLDKD HPLVMKEGVK IYGGFAGTET SLGERDLSVK VNNSILRGSG
QLVVANSDAG ITPSAVLDGF TITGGMNGIS NSQSSPTLSN LLITGNPLNG AFMAGGIMNY
ESNAITTNCA IVGNQGSGTV VGIVNMSSSP VITNCTITGN TTTGPGSVGI ANLGNSGPKI
RNCIIYGNQL GVFSEPSSSP TIEYSLVDPN PPTDPNAPQP PGIDPLFVNA AAGNYRLQPC
SPGVNTGFNY FQAGLTPDLS GLNTDLESKP RIREHMTDMG AYEFGGETRE LASDLDEASA
TIDRDKVLTS FDSNCRLVAY LLPNGPAPVK GYVSAKVWVA SSQPANFVKR HYQISPGIDT
QQATARVTLY FTQQEFTDFN EVNEIKLPLD AADVENHKAN LWIEKRPGFS IDGSGLPNSY
IGDVVSFKPS EANGKIEWNA DARHWEVSFD VTGFSGFFVK TRQSTLPLNL VSFTATKEAG
SNVLQWSTAS EINTDQFEIQ RSSNARTFVG VATVEAAGSG SSQYSYHDRT GHDRTSYYRL
KMSDLDGTFS YSKIISLAAH GDGAGIYPNL ARASITFQAS DALLQTTAHL YDIMGHRVQS
ITVTSNRQQL DTEQLISGLY ILKFADGTVQ RFVKE
|
|---|
| |