Gene Dfer_0782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0782 
Symbol 
ID8224351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp921584 
End bp921958 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content47% 
IMG OID644928653 
Producttranscriptional repressor, CopY family 
Protein accessionYP_003085207 
Protein GI255034586 
COG category[K] Transcription 
COG ID[COG3682] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.130795 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.268772 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACCCC GTTCACTCAC CCGGGCCGAA GCTGAAATCA TGAAGATTCT CTGGCAACTG 
GGTAAAGCAT TCATTAAAGA CATCCTCGCG CAAATGGATG ACCCGAAACC TGCGTATACG
ACGGTCGCGA CATTCGTGAG AATACTGGAA AAGAAGGGCA TCGTGGCCCA TAACACCTAC
GGCAACACCC ACGAATTCTA CCCGCTCATC AGCGAGCAGG AATACCGCAA ATATGAAGTC
CAGCAGCTTG TCGAAAATTA CTTCGACAAT TCCGTGTCCA ATCTGGTCTC CTTCTTCATG
AAAGACGACA ATCTAAAAAA GAGCGATCTG GACGATTTGG CCGCATTTAT CGAAAAAAAC
AGAAGCAAAA GCTAA
 
Protein sequence
MEPRSLTRAE AEIMKILWQL GKAFIKDILA QMDDPKPAYT TVATFVRILE KKGIVAHNTY 
GNTHEFYPLI SEQEYRKYEV QQLVENYFDN SVSNLVSFFM KDDNLKKSDL DDLAAFIEKN
RSKS