| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0656 |
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| Symbol | |
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| ID | 8224225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 762324 |
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| End bp | 766244 |
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| Gene Length | 3921 bp |
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| Protein Length | 1306 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644928529 |
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| Product | membrane-bound dehydrogenase domain protein |
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| Protein accession | YP_003085083 |
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| Protein GI | 255034462 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
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| TIGRFAM ID | [TIGR02604] putative membrane-bound dehydrogenase domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0724303 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAGT CCACATTGCA GCACATCTTC CTCGCCGTCA TGTTGTCGGT CGTTTGGATA
AACCCTTCCA GCGGACAGGC GCCTAACCCG GGCTTTGCCC CCAAAAAAGG CGACCGCATC
ATCCTGCTGG GCAACACATT CGCCGACCGG ATGCGTCACT ACGGCTATTT CGAAACCTTA
CTTCAAAAGA ACTTCCCCGG CGGGGAGCTC ACCCTGCGGA ATATGGGGTG GAGCGGCGAT
GAAGTGGGCT TGCAGCCACG GCCGCTGAAT TTCCCCGGTT TTGGAGAAAA AACGAAGCGG
CTTACCGAGG GGCAGAAAGA GGTAAAATTC CAGGGCTTCA CGCACGAAGG CGAGCGGATC
GTGATGCCCG TCGCGCTGAA TTTCGAAGGC CTCAACCAGG ACCTGTACGA TCAGCAGGCG
GACATTATCT TCCTCTGTTT CGGGATGAAT GAGGCCTTTA AAGGCGCTGC GGGCCTGCCG
CAGTTCGAAA AAGACCTGCG AGCATTTATT CAAAACCTGC AAAACAACCG CTACAACGGA
ATGTCGGCCC CTACCCTCGT GCTGGTGTCG CCCATCGCAC ATGAGGCGCT CGGCGGGCAT
TTTCCCAACC CCGCGGAGCA CAACAGGGAC CTGGAATTGT ACACCGAAAC AATGCAGAAA
ACCGCCTCCG CGAAAGGGCT GTCTTTCATA GACTTGTTCA CACCTTCCCG CGACAGAATG
CAAAAAGGCG GACAAAAGCT GACCATCAAC GGCATTCATT TGACGGACGC AGGCTACAAG
GAGGCGGCCG GGTGGATGGC GCAGTCGCTG GGTTTTGGAA AAATGCCCGA TTGGAACAGC
GACAACAGCC GGAAGCTGCT GTCGGTTGTG AAAATGAAAG ACGACCACTT CTCTTACCGC
TGGCGGGCGG TGAATGGGGA ATACATTTAC GGCCGCCGAA GAGAGCCTTT CGGGGTGATC
GCATTCCCGC CAGAGCTCCG GAAGCTGAAC CAGATGACGG CTTCGCTCGA CTCGGTGATT
TGGGAAATGG GCAAAAGCAA CGACGTCGCG GCATTTCCCA AGGCCATCGA CATCGTGGAC
CGGCGTGGAA AACCGGCGGA CCCCACGCTC ACACCCAACG TCCCGATGAC CGGCCGGCAA
GGCGAATCAG CCAAAGCAGC CGCACACGCC CATCACGAAA AAATGTGGCC CGCCACGACC
GATAGGTTCA AATTACCCGA GGGCTATCAG ATCAACCTGT TCGCGTCCGA GCAGGATTTC
CCGATCGAAA AACCCGTTGC GATGAACTTC GACGCCCGTG GACGCCTCTG GGTCGCGACG
ATGCCTACCT ACCCGCAGTA CTTTCCCGGA ATTCCGGTGC ACGACAAAAT TGTGATCCTG
GAAGACACCG ACGCCGACGG TAAGGCCGAC AAACACACCG TTTTTGCCGA CGACCTTTAT
CTCCCGCTGG GTTTCGAATT TGGCGACGGC GGCGTTTACG TGTCGCAGGA GCCGGACATT
CTCTTCTTGA AAGACACCGA CGGCGACGGC AAAGCCGATG TCCGGGAAGT AGTACTAACC
GGTTTCGGCT CGGAAGATAG CCACCACGCC ACACACGCAT TCACCTTCGG GCAGGATGGT
GCATTGTATT TTAATGAGGG CACGTTTCTG AACACGCAGG TAGAAACGCC CTACGGCCCC
ATTCGCTCCT ATGCGGGCGC AACGTACCGC TACGAGCCGC GCACGGCGAA GCTGACGCAT
TACATTTCGT ATCCTTATTA CAATCCCTGG GGAAGTATTT TTGATAAATG GGGCATGCAC
CTCATCGGCG ACGCGTCCGA CGGCTCCAAC TATTTTGCCC CGCCCATGAC CGGCAACGTC
ACCTATCCCG ACAAACATCC GCGCATTGAC ATGTTCACCG AAACGCGCGT CAGGCCCACG
GCAGGTATCG AAATCGTTTC GAGCAGGCAA TTTCCGGATG ATGTACAAGG CAATTTCCTC
GTCAACAACA ACATCGGCTT CCAGGGTACC AAGCAGCACC GGATCATCCC GCACGGCTCG
GGCATCGGCA GCAAGGAAGT GGAGGCGATC CTGCAATCGG AAGACCCGAA TTTCCGCCCG
ATCGACATTG AGTTCGGCCC CGATGGTGGA TTATACATTG TCGATTGGTA CAATCCGCTG
ATCTCGCACG GCGAAAACCC GCCGCGCGAC CCTGCCCGCG ACAAATCGCA CGGCCGCGTG
TGGCGCATTA CCTACAAGGG CAAACCGGCG CTGAAAGTAG TCGACGTATC GCGGCAAACG
GTGCCGCAGC TGCTGGATAA TCTCAAAGCT TACGAGGACC GTTTCAGGTA CCGCTCGCGT
GCGCAAATCC GTGAAAAGCC GGATGCGGAA GTACTGCAGG AGCTGAAAAA ATGGGTAGCC
GCGCTGGACA AGAACGATCC GCAATATGAG CATCATCTGC TCGAAGGCTT ATGGCTCTAC
CAGGATTTCA ATGCGCCCGA GCCGGCCATT TTGAAAACGT TGCTCCATAC CAAAGAACCG
CAGGCGCGCG CGGCGGCCAC GAAAGTGCTG CGCTACTGGC GCGACCGCGT TCCCGGCGCA
CTGGAACTGA TGCGTGCCCG GCTGAACGAC GAATCGCCCC GCGTGCGCAT TGAGGCGATG
GTAGCCCTTA GCTTTTTCAA TTCGGAAGCG GCCGTTGCCG CGGCTACGGA TATCTTCCAA
TATCCAGGCG ACTATTACAT GGATTACGCC ATGCACGAAA CTTTCCGTTT CCTGAAACCG
ATCTGGCTCT CGGGAATGAA GAAGGGGCAG ACCTTTGGAA ACAATACCAA ACAAGCCCGG
CGCTACCTGC TTAAACTTGC CAATGCCGGT GAGCTCGCCG CCTTTCCGCA AACTGCGGAC
GTGCTCACGG CCCTACTCGC CCGACCGGAC ACGGATGCCG CCAAAAAAAC GGAAGCCCTC
AGCCGCCTCG CCAAAATGCA GCATACCGGC AAGGTTAATG TGCTCCTGAC CGCCATTCGT
GAGGAAGAGC AAAGCAGAAA ACCCAACCGG CAAAGCCCGG CCCAGCAGGA ACTGATCAAG
CTCCTGCTCG CCTCGGGCCC ATCGGAATTA AAGCAGAACC AGGCTGAACT GACACGGCTC
GTTCACGCCG ACACGAGCCT GATCATGCAA GCGACCGGTT TTGCCGCATT AATTTCCGCC
CGTCAGCCGG TGCAATCGCT GGAAAAAACT GCGGAAGGAA AAACAGCCGC CTACTTAACC
GGCATTTCAA TGCTACCCGA TGCGGACTTG AAAGCATCAT TTTTCCGGCA AGTACGGCAA
CTCGCGCCAC GCGCGCCGGA AATTGCCTAT CCTTTGCTTC TGAAAATGAC GATAGAGAAT
GAAGCCAAAA CGCAGCCGGC CAAAGCACTG GTGGCGTCGT TGAAAGATGT GCCGGCATCC
GTGCAAAATT CAAAGGCATT TGCAAAGGCC GTCACCACGA TGAAAGGCAT GCTGAATGCC
GTGCCGGAGA AGAACAGGAA GGAGGTGCTG GCCCTTCTCG AAAGCATGGG AACGATCGAG
GTCCGGCTCG TGGCTGTGGA GGCTAAAATG GCTTTTGACA AAAAAGCGCT CACCGTCCCG
GCTGGCAGGG CCGTAACGCT GGTGTTCGAA AACCCCGATC TCATGCCCCA TAATGTCGTG
ATCGTGAAGC CAGGCACTGC CGAAAAAGTA GGCGAAGCAG CCGACGCCAT GGCGACTTTA
AAAGACGGCT TCGAGCGAAA CTTCGTACCT GCCACACCCG ACGTGCTCTT CGCGACACCG
CTTGTAAATG CGGGCAAGAG CTTCCGGCTG GAATTCAAAG CACCCGCCGA GCCGGGCGAG
TACCCGTTCA TCTGCTCCTT CCCGGGGCAT TGGCGGGTAA TGCAGGGAAT CCTGACAGTT
ACCGATGCCA AAGTACCCTG A
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| Protein sequence | MNKSTLQHIF LAVMLSVVWI NPSSGQAPNP GFAPKKGDRI ILLGNTFADR MRHYGYFETL
LQKNFPGGEL TLRNMGWSGD EVGLQPRPLN FPGFGEKTKR LTEGQKEVKF QGFTHEGERI
VMPVALNFEG LNQDLYDQQA DIIFLCFGMN EAFKGAAGLP QFEKDLRAFI QNLQNNRYNG
MSAPTLVLVS PIAHEALGGH FPNPAEHNRD LELYTETMQK TASAKGLSFI DLFTPSRDRM
QKGGQKLTIN GIHLTDAGYK EAAGWMAQSL GFGKMPDWNS DNSRKLLSVV KMKDDHFSYR
WRAVNGEYIY GRRREPFGVI AFPPELRKLN QMTASLDSVI WEMGKSNDVA AFPKAIDIVD
RRGKPADPTL TPNVPMTGRQ GESAKAAAHA HHEKMWPATT DRFKLPEGYQ INLFASEQDF
PIEKPVAMNF DARGRLWVAT MPTYPQYFPG IPVHDKIVIL EDTDADGKAD KHTVFADDLY
LPLGFEFGDG GVYVSQEPDI LFLKDTDGDG KADVREVVLT GFGSEDSHHA THAFTFGQDG
ALYFNEGTFL NTQVETPYGP IRSYAGATYR YEPRTAKLTH YISYPYYNPW GSIFDKWGMH
LIGDASDGSN YFAPPMTGNV TYPDKHPRID MFTETRVRPT AGIEIVSSRQ FPDDVQGNFL
VNNNIGFQGT KQHRIIPHGS GIGSKEVEAI LQSEDPNFRP IDIEFGPDGG LYIVDWYNPL
ISHGENPPRD PARDKSHGRV WRITYKGKPA LKVVDVSRQT VPQLLDNLKA YEDRFRYRSR
AQIREKPDAE VLQELKKWVA ALDKNDPQYE HHLLEGLWLY QDFNAPEPAI LKTLLHTKEP
QARAAATKVL RYWRDRVPGA LELMRARLND ESPRVRIEAM VALSFFNSEA AVAAATDIFQ
YPGDYYMDYA MHETFRFLKP IWLSGMKKGQ TFGNNTKQAR RYLLKLANAG ELAAFPQTAD
VLTALLARPD TDAAKKTEAL SRLAKMQHTG KVNVLLTAIR EEEQSRKPNR QSPAQQELIK
LLLASGPSEL KQNQAELTRL VHADTSLIMQ ATGFAALISA RQPVQSLEKT AEGKTAAYLT
GISMLPDADL KASFFRQVRQ LAPRAPEIAY PLLLKMTIEN EAKTQPAKAL VASLKDVPAS
VQNSKAFAKA VTTMKGMLNA VPEKNRKEVL ALLESMGTIE VRLVAVEAKM AFDKKALTVP
AGRAVTLVFE NPDLMPHNVV IVKPGTAEKV GEAADAMATL KDGFERNFVP ATPDVLFATP
LVNAGKSFRL EFKAPAEPGE YPFICSFPGH WRVMQGILTV TDAKVP
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