Gene Dfer_0626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0626 
Symbol 
ID8224195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp722081 
End bp722800 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content54% 
IMG OID644928500 
Productprotein of unknown function DUF421 
Protein accessionYP_003085054 
Protein GI255034433 
COG category[S] Function unknown 
COG ID[COG2323] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0141494 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.718153 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGG AAGACATAGT TCCCGGCGAC TGGTACCGCA TTCTGTTCGG GGAAACGCCG 
GTCGTATTTT TAGTTGAAAT TCTCCTCAGG ACCATTCTCA TGTACGCCAT TCTTCTCATT
ATCGTGCGGA TGATGGGCAA GCGAATGGGT GGCCAGCTCA CCATTTCGGA CCTGGCCGTG
ATGATCACCC TCGGGGCAAT TGTGTCGCCG GGTATGCAAA TGCCGCAAAC CGGCCTCCTG
CTGTGCGGGA TGATCCTCGT GTGTGCGCTC CTGTTCCAAC GCGGACTTAA TTTTTTCGAA
TTTAAAAGTG AGCGTTTCGA GCAGGCAACG CAGGGGAAAC TAAGCGTTCT CGTCAAAAAC
GGCGTAATGC AGCTCGAAGA AATGCACCGT ACCAAGGTCT CGCGCCAGCA GATTTTCTCG
GCGCTGCGCA ACAACCAAAT CTATAATCTC GGCGACGTAG CCCGCGTGTA CCTGGAATCC
TGCGGGCTGA TCACCATCTA CCGGCATCCC GAAGCAGGTG CCGGCCTGCC CTTATTTCCA
CCCGGCGACG AGGCTATTTC CGGTTTTGGA CAAACATCCG TGGAAAATAC GCTCGTTTGC
GCCAACTGCG GAAAAGTGCC TGAAAGTCAA GACCGGCAGC AGCATTGCCC CGTTTGCAAC
GCTACGCAAT GGGGTCAGGC CAGCATTTCC ATTTCCAACC AACCCAGCCA CGCCGCATGA
 
Protein sequence
MKKEDIVPGD WYRILFGETP VVFLVEILLR TILMYAILLI IVRMMGKRMG GQLTISDLAV 
MITLGAIVSP GMQMPQTGLL LCGMILVCAL LFQRGLNFFE FKSERFEQAT QGKLSVLVKN
GVMQLEEMHR TKVSRQQIFS ALRNNQIYNL GDVARVYLES CGLITIYRHP EAGAGLPLFP
PGDEAISGFG QTSVENTLVC ANCGKVPESQ DRQQHCPVCN ATQWGQASIS ISNQPSHAA