| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0606 |
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| Symbol | |
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| ID | 8224175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 689154 |
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| End bp | 690131 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644928481 |
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| Product | TonB family protein |
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| Protein accession | YP_003085035 |
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| Protein GI | 255034414 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCCAA GAATACCTGA ACCGCTTCTC CTGAACTACC TCACTCTTTT GCTGATCGCC
GCCGCGGTAA CCCCCGCACT GGCGACAAAC CGGCACTACC GCAACGACAG CCTGGACGCC
AGGCCCGCAT TCCTGCAAAC TACGCGCATT GCAGGCCGCA TTACCGACGG TGCATCGCGG
CCGGTCGCCA ATGCGGCGGT GCTGATCGCA GGGTCCGAGC GGGGCACGAT TTCCAATCTG
TCGGGCAGTT TTGAGATCCC CGATGCGCCG TTGAGCGGGA TGCTCGTGAT CAAACATCCC
GATTTTGAGA CCAGGCAGCA GCCGATCCTC CAATCCGTAA TCGAATACGC GATCGTTCTG
AAACCGATGC CCAGAACGGC GCTCCGAAGC CAGGCGAAGG CTTCCAAAAA AGAATCGGAA
GCCGCTACCG AAAGCAGCTC CCCGCTGCGC CTCGACCGCT GGCCCTATTT CCAGGGCGGC
TACAAGGCTT TGAACAAATT TTTGGCCAAC AACCTCAAAT ATCCCAGGCA GGCACGCGAA
AACGGCGTAG AAGGCCCGGT GCAGGTTTCA TTCCTGCTGG ACGAGGACGG GAATGTTAGC
AGCGGCCGCA TTGTGAAAAG CCCCGGTACG GAGCTGGATG AAGAGGCGCT TCGGCTCGTG
GGCATGATGC CCAAATGGAC GCCTGCACAG AAAGACGGGA AGCCGATCGC CGTCTGGTAC
ACCATCAGCA TTCATTTTGA TCCGCAGGTG GATAACCTGC CTTTGAAGAT CAAGGAAGAA
ATTCCCAAAC TGTTCAGCCG CAAAATGAAG ATGGACCCCG TGAAAGCGCC GCTGCCCGTT
AAAGCGGAGT TTAAAAGGCT GTTCAATTCC GGTGCAGTAG ACCTTTCGGC GCATGAACCT
CCGCAAACGC GCCTCCGCAA TTACGGCGGC GGATATGCGA CGAGGCCATT CTACGTGCCA
TTCAAATTCC AGCCGTAA
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| Protein sequence | MQPRIPEPLL LNYLTLLLIA AAVTPALATN RHYRNDSLDA RPAFLQTTRI AGRITDGASR
PVANAAVLIA GSERGTISNL SGSFEIPDAP LSGMLVIKHP DFETRQQPIL QSVIEYAIVL
KPMPRTALRS QAKASKKESE AATESSSPLR LDRWPYFQGG YKALNKFLAN NLKYPRQARE
NGVEGPVQVS FLLDEDGNVS SGRIVKSPGT ELDEEALRLV GMMPKWTPAQ KDGKPIAVWY
TISIHFDPQV DNLPLKIKEE IPKLFSRKMK MDPVKAPLPV KAEFKRLFNS GAVDLSAHEP
PQTRLRNYGG GYATRPFYVP FKFQP
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