Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_0603 |
Symbol | |
ID | 8224172 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 686616 |
End bp | 687167 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644928478 |
Product | response regulator receiver protein |
Protein accession | YP_003085032 |
Protein GI | 255034411 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3279] Response regulator of the LytR/AlgR family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATATAG CAATTTTGTA TCGCAGCCAA ACGGAAGGCC GCCGGTCGAA AGCCCTGTTT TCGGAACCGG TTTGCTCCGA GGGGGCTGTT AGCCATGAAA GTCAATTAAT AATAGCCATG AAAGTAACCA ACGCAATGCC AGATCAATCC ATGAAAAATC AATCGGCCCT GTCACCCATG AAAAACCTGT CCATTATCAC AACCGGAGCT GCCGGCGAAG TTATGAGTGT TCCCGCGATC ACCGTTTACA AGTTCGGGAA AGCGATTACC GTGAAGTCCA GCGACATTAC TTGCCTGGAA GGTGTAGGAA ACTACACATT TGTATACACC CGGCACGAGA AGCACCTGGT TTCGAAATGT TTGAAAGAAG TGCAGGATGA GCTGAGCAGC GATTTCCTGC GAATCCACAA ATCATATAGC ATTAATGCCC GCCATATCAA GTCGCGCTGG CCGGATTACA TTCACCTGAG CTGCGGCAAG GTAATCCCGA TCGCCCGCCG CCGCATCCGC GAAACCCACG AAATACTGGG CAGAATGGCA CTCTCGGCGT AA
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Protein sequence | MDIAILYRSQ TEGRRSKALF SEPVCSEGAV SHESQLIIAM KVTNAMPDQS MKNQSALSPM KNLSIITTGA AGEVMSVPAI TVYKFGKAIT VKSSDITCLE GVGNYTFVYT RHEKHLVSKC LKEVQDELSS DFLRIHKSYS INARHIKSRW PDYIHLSCGK VIPIARRRIR ETHEILGRMA LSA
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