Gene Dfer_0603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0603 
Symbol 
ID8224172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp686616 
End bp687167 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content50% 
IMG OID644928478 
Productresponse regulator receiver protein 
Protein accessionYP_003085032 
Protein GI255034411 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3279] Response regulator of the LytR/AlgR family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATAG CAATTTTGTA TCGCAGCCAA ACGGAAGGCC GCCGGTCGAA AGCCCTGTTT 
TCGGAACCGG TTTGCTCCGA GGGGGCTGTT AGCCATGAAA GTCAATTAAT AATAGCCATG
AAAGTAACCA ACGCAATGCC AGATCAATCC ATGAAAAATC AATCGGCCCT GTCACCCATG
AAAAACCTGT CCATTATCAC AACCGGAGCT GCCGGCGAAG TTATGAGTGT TCCCGCGATC
ACCGTTTACA AGTTCGGGAA AGCGATTACC GTGAAGTCCA GCGACATTAC TTGCCTGGAA
GGTGTAGGAA ACTACACATT TGTATACACC CGGCACGAGA AGCACCTGGT TTCGAAATGT
TTGAAAGAAG TGCAGGATGA GCTGAGCAGC GATTTCCTGC GAATCCACAA ATCATATAGC
ATTAATGCCC GCCATATCAA GTCGCGCTGG CCGGATTACA TTCACCTGAG CTGCGGCAAG
GTAATCCCGA TCGCCCGCCG CCGCATCCGC GAAACCCACG AAATACTGGG CAGAATGGCA
CTCTCGGCGT AA
 
Protein sequence
MDIAILYRSQ TEGRRSKALF SEPVCSEGAV SHESQLIIAM KVTNAMPDQS MKNQSALSPM 
KNLSIITTGA AGEVMSVPAI TVYKFGKAIT VKSSDITCLE GVGNYTFVYT RHEKHLVSKC
LKEVQDELSS DFLRIHKSYS INARHIKSRW PDYIHLSCGK VIPIARRRIR ETHEILGRMA
LSA