| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0602 |
|---|
| Symbol | |
|---|
| ID | 8224171 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 685312 |
|---|
| End bp | 686382 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 644928477 |
|---|
| Product | signal transduction histidine kinase, LytS |
|---|
| Protein accession | YP_003085031 |
|---|
| Protein GI | 255034410 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3275] Putative regulator of cell autolysis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCATTG AACATTACCT GGCGAAATTC GGCCGCAAGC AACTGAGTGC CACGGCGTCG
GTGCTGCTGC TCGGCGGAAC CGCACTGCTC GCCGGCTTCG GGCTGTGGCA GGAAAGGTAT
TTCTCCGACA GCCGGCATTT TCTCATCGGA AGCTGCATCA ACCTGGCCGC GATCTGGGCC
GCCTACCGGA TCGACACTTT GCTATCGGTG CGCGTAACGC GCTTTTTTCC CGAAACGGAA
CAATCCATTT CCCGTGTGGC ATCCTGGTTC GGGGCGTATG CGGCAGTGAA TGTGGCCCTG
TTCTGGGCGG CATTGCCGGT GTACCGGCTG GCCGGGCTGG GCGGGCAGGG AGCGGACTTG
CAGTGGGCAA TGCGCGTGAG TTTTTTTATT CTCAGCGCAT CGCTGATCGG GGCGGGACTT
ACTGAACTTA CCTACGCGTT TCGTCAATGG CGGTCCAACC AGGATGAGCT GGAAGTGATG
CAGGAAAAAC AGCTGCAAAC CGAGCTCGAT GCCGTCAAGC AGCAGGTGAA CCCGCATTTT
TTGTTCAATT GCCTCAATTC GCTCTCCGTT CTCATTGCCG ATGCGCCCGC CACTGCCGAG
AAATTCGTGG ATGAAATGTC GAAGGTGTAC CGCTACCAGC TGAGCGTCAA CGGCCCCGAC
AAGGAAGACA TGCTCGTTTC GCTCGATTCG GAGCTGCGGT TTATCCGATC CTACATTTAC
CTGCTCGAAA CGCGGTTTGA GGCCGGGATA AGCGTTGACC TGGACGTGCG CGAAGTGTTT
TTATGCGGCC AGATGGTGCC GCTCACCTTC CAGATCCTTA TCGACCACGC GATCCACTAC
AACGTCGTGT CGGCGGCCAG GCCGCTGCAT ATCCGCATTT CGACCACCGA AACAGGCCAG
CTGGAATTTG CCCACAACCG CCAGCCGAAA ATGCTCAGCA TGCCCCTCGA AACACCGGGC
ATCAGCGTGC TCACCTCGCG GTACAAGCTG CTTTTTAACC GCGCGGGAGC GGTTCAGTAC
AAAGAGGACG ACCAACAGTT TGCGATCATC GTGCCCCTGA TATTTACATG A
|
|---|
| Protein sequence | MIIEHYLAKF GRKQLSATAS VLLLGGTALL AGFGLWQERY FSDSRHFLIG SCINLAAIWA
AYRIDTLLSV RVTRFFPETE QSISRVASWF GAYAAVNVAL FWAALPVYRL AGLGGQGADL
QWAMRVSFFI LSASLIGAGL TELTYAFRQW RSNQDELEVM QEKQLQTELD AVKQQVNPHF
LFNCLNSLSV LIADAPATAE KFVDEMSKVY RYQLSVNGPD KEDMLVSLDS ELRFIRSYIY
LLETRFEAGI SVDLDVREVF LCGQMVPLTF QILIDHAIHY NVVSAARPLH IRISTTETGQ
LEFAHNRQPK MLSMPLETPG ISVLTSRYKL LFNRAGAVQY KEDDQQFAII VPLIFT
|
|---|
| |