| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0589 |
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| Symbol | |
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| ID | 8224158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 669265 |
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| End bp | 670278 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644928464 |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003085018 |
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| Protein GI | 255034397 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00102847 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACACAA CACGCCGTCA ATTCCTCGGC CAGCTCGGAC TGGCCACTGC CGGGCTCGGT
TTCGCACCGC TCGCCGCGCG GCCAGCCGCC AAATTCAGTT TCGACATTTC CCTCGCCGAG
TTTTCGTTCG CCTCAGAGCT TTTCAGCGGT AAAATGACCA ATATGGATTT TCCGGCGCGG
GCGAAGAATG ACTATAACAT CACCATTCTC GAATACGTTT CCGGCTTTTT TAACAATAAA
CACAAGGATC AGGTCTATCT CAAAGAGCTG AAACAGCGCT GCGACGACCT GGGTATGAAA
AATCACCTCA TCATGGTCGA CGGCGAAAAC CTCACGGCGT TGGATGACGC GGCGCGGACC
AAGGCCGTGG AAGCGCATTA TCCCTGGGTA GATGCCGCCA AATTCCTGGG CTGCTCGGCC
ATCCGCGTGA ACCTCGGCGA CGCGATGGCG ATGCTTTCGG GCAAAAAGGA GGAAGGCACG
CCCGCACAAC TCGCCACGGC CGCTGTGGAC GGCTACGGCA GGCTTCTCGA ATTTGCAGGC
AAGGCAGGCA TCAATGTGAT CGTGGAAAAC CACTTCGGAG TGTCCACCGA TCCCGATTGG
CTGGTAGGGG TGATGAAGCA ACTGAAAGCG CCGAACAAAG GCCTGCTGCC CGATTTTGGC
AACTTTTGCG CCGAAAGAAG CAAGCCCGAA ACGCTGGATA TCAAAGGGTT TATGGCGACC
AAATGCGTGA AGGAACACGA TAAATACGAA GGCGTGCGGA AAATGATGCC CTACGCGAAA
GGGATCAGCG CAAAAACGCA CCAGTTCGAC GCGAACGGCA ACGACCCGGA GACCGATTTT
ATCAAAATTT TCAAGATCAT CAAGGACTCC GGCTGGAACA ACGGCATCGT GGGAATCGAG
TATGAAGGCG GCCTGATGCG CGAAATGGGC GGCGATACTT CCAAGCCTAC CAACGACGAG
GGTATCCGCA AGACGAAAGC GCTGTTGGAG AAGGTGTTAA AGGAGTTAGG TTAA
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| Protein sequence | MNTTRRQFLG QLGLATAGLG FAPLAARPAA KFSFDISLAE FSFASELFSG KMTNMDFPAR
AKNDYNITIL EYVSGFFNNK HKDQVYLKEL KQRCDDLGMK NHLIMVDGEN LTALDDAART
KAVEAHYPWV DAAKFLGCSA IRVNLGDAMA MLSGKKEEGT PAQLATAAVD GYGRLLEFAG
KAGINVIVEN HFGVSTDPDW LVGVMKQLKA PNKGLLPDFG NFCAERSKPE TLDIKGFMAT
KCVKEHDKYE GVRKMMPYAK GISAKTHQFD ANGNDPETDF IKIFKIIKDS GWNNGIVGIE
YEGGLMREMG GDTSKPTNDE GIRKTKALLE KVLKELG
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