| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0578 |
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| Symbol | |
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| ID | 8224147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 655887 |
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| End bp | 657137 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644928454 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_003085008 |
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| Protein GI | 255034387 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0382538 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATTTT ACCTGATCGG GCTACTGGTC TGTGCGAGCG TATTCGTGCA GGCACAGGAC
ACCCTCAAAG TGACCGTCCG GCAGGCGGAC AGTCTCTTTT TGAAAAACAA CCTGACCCTG
CTCGCCGAAC GTTACCAGAT CGACATCGCG AAGGCCGCCG AAATCCAGGA CAAACTTTGG
GATAATCCCA ACCTGAGCAT CGAACTGAGT GCCTACAACC CCTCGCGCGG ATGGCTGGAT
GTGGGCAGGG GAGGCCAGAA GTTCATAAGC CTGCAACAGG TGATCACCCG CGCCGGCAAG
CGCACGAAGC AAGTGGCGCT GGATGTGGAG ACGACCCGGA AAACGGAGCT GGAATTTTTC
GACCTGGCCC GCACGCTGAA ATTCGATCTC CGGCAACTGT TTTTCGAAAC CCATTTCCTG
GGGCAGACCT TGCAACTGCT GGATAATCAG ATCGCTACGC TGGCGACCAC CGTCGAGGCG
TTTGATCGGG AATATGGCCG GAACAATGTG TCGCTCAAAG AAGTGGTGCG TTTGAAAGCC
CTGCTGTTCC AGCTTCGCAA CAACCGGGCG GATATTCTGT TTGAAATAAC TGAAAACCAG
CGTGATTTAC GGATTTACTT CAACAGCGAA GCCTACGTGG TGCCGGTGGT CGACAGCCTG
GAAATGGCCC GGTACCGGCT GGAAAAGCAA ACGCCCGGCG ACCTCCGCGA GCTCGCATTG
CTGCGCCGGA CGGACCTGAA AGTGGCCGAG TCGGCCGTGA AGCAGGCGGA ATTGAATTAC
AACCTGCAAA AGGCGCTGGC CAAACCGAAT ATCGAAGTGG GGGCCGTGTA CGATCAGGCG
AGCAACTATC AGTTCCATTA TTTCGGGCTT TCTGCATCGA TGAACCTGCC GTTCTTCAAT
CGGAACCAGG GTAACATCCG CGCGGCGAAA AGCGGTATCA GCTATTTCAA AACGCGGGAA
ACCGCCAAAC GAAACAGCAT CGCCAACGAG GTAAATGCCG CCTGGAACAA GGTAACCATT
GCGGAAAATG CATTCAGGAG CGTGGAGACA AGGTTTTCCG ATCAGTTTTC GCAGCTCAAT
CGCGGCATGT ACGACAATTT TCAAAAAAGA AATATAACCC TCCTCGAATT CATTGATTTC
ATCGAAACCT ACAACGAAAG CATCCGGGAG TTCAACCGGT TGCAGGCCGA CCGGATTAAG
GTCTACGAAG AGCTGAACTT TGTAGTCGGG GAAGAATTAT TCGGCCTTTA A
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| Protein sequence | MRFYLIGLLV CASVFVQAQD TLKVTVRQAD SLFLKNNLTL LAERYQIDIA KAAEIQDKLW
DNPNLSIELS AYNPSRGWLD VGRGGQKFIS LQQVITRAGK RTKQVALDVE TTRKTELEFF
DLARTLKFDL RQLFFETHFL GQTLQLLDNQ IATLATTVEA FDREYGRNNV SLKEVVRLKA
LLFQLRNNRA DILFEITENQ RDLRIYFNSE AYVVPVVDSL EMARYRLEKQ TPGDLRELAL
LRRTDLKVAE SAVKQAELNY NLQKALAKPN IEVGAVYDQA SNYQFHYFGL SASMNLPFFN
RNQGNIRAAK SGISYFKTRE TAKRNSIANE VNAAWNKVTI AENAFRSVET RFSDQFSQLN
RGMYDNFQKR NITLLEFIDF IETYNESIRE FNRLQADRIK VYEELNFVVG EELFGL
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