Gene Dfer_0546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0546 
Symbol 
ID8224114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp614388 
End bp615371 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content58% 
IMG OID644928421 
Productoxidoreductase domain protein 
Protein accessionYP_003084976 
Protein GI255034355 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.881948 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.774462 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCAGA TCAAATGGGG TATTATCGGT TGCGGCAACG TGACTGAGGT AAAAAGCGGT 
CCGGCATTCA GTAAAGTGCC CAATTCTTCA TTGGTAGCCG TAATGCGCCG CGATGGCGCG
CTCGCAAAGG ACTACGCCGA ACGCCACGGC GTGGCCAAAT GGTACGACGA TGCCGACGCG
CTCATCAACG ACCCCGACGT GAATGCCGTT TACATCGCCA CTCCGCCCGA TGCGCACGAA
AGCCTGGCCA TCCGGGCCAT GCAGGCCGGA AAGCCGGTAT ACATCGAAAA GCCCATGGCC
CGGAACGCCG CCGAATGCGA CCGGATCAAT GCGGAAAGCA AACGGACGGG CGTGCCCGTA
TTTGTGGCCT ACTACCGTCG CTCGCTGGAT TACTTCCTGA AAGTGAAGGA ATTGATTGAT
AAAAAAGTGA TCGGGGATAT CCGCTATATC GACATTTGCC TGCAATGGCA GCCGTACGAC
GAGGAGGTAG GGCCGGATGC GAAGCCTCGC TGGCGCGTCA AACCGGAGAT TTCCGGCGGC
GGGCATTTCC ACGACCTGGC CTCGCACCAG TTCGACCTGC TCGAATTCAT CTTCGGCCCG
ATCAAGCACG CGTCGGGCAT TGCACGCAAC CAGGCGGGCC TGTACGAGGC GGACGATATC
GTGGTCGCCA ATTTCGAGTT CGAATCGGGC GTGTTGGGCA AGGGCAGCTG GTGCTACACG
GTGGATAAGG ACCAGCGCGA GGACCAAACG CAGATCATCG GTTCAAAGGG ACGCATTACC
TTTTCGTTTT TCGAAAAGTT CGACATTCAC CTGGAAACGG GGGAGGGGAT CGAAGTCTTT
CACATTCCCT ACCCGCAGCA TGTGCAGCAA CCGCTCATCG CTTCCATCGT GGCAGAACTG
CGCGGCGAAG GTAAGAGCCC GAGCAGCGGC GACACGGGTG CACGGGCGAG CCTGATCATG
GACCGCATCA CCAGGAAGCA ATAA
 
Protein sequence
MDQIKWGIIG CGNVTEVKSG PAFSKVPNSS LVAVMRRDGA LAKDYAERHG VAKWYDDADA 
LINDPDVNAV YIATPPDAHE SLAIRAMQAG KPVYIEKPMA RNAAECDRIN AESKRTGVPV
FVAYYRRSLD YFLKVKELID KKVIGDIRYI DICLQWQPYD EEVGPDAKPR WRVKPEISGG
GHFHDLASHQ FDLLEFIFGP IKHASGIARN QAGLYEADDI VVANFEFESG VLGKGSWCYT
VDKDQREDQT QIIGSKGRIT FSFFEKFDIH LETGEGIEVF HIPYPQHVQQ PLIASIVAEL
RGEGKSPSSG DTGARASLIM DRITRKQ