| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0537 |
|---|
| Symbol | |
|---|
| ID | 8224104 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 603841 |
|---|
| End bp | 606930 |
|---|
| Gene Length | 3090 bp |
|---|
| Protein Length | 1029 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644928411 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003084967 |
|---|
| Protein GI | 255034346 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning
[Z] Cytoskeleton |
|---|
| COG ID | [COG5184] Alpha-tubulin suppressor and related RCC1 domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.244955 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.441829 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCAA ACTTTACAGT ACTAACCAGA GGGCTTCTTT GGTTCCTGCT ACTTTCGGCA
AAATCATTAT TTGCCCAATT GGGCTGTTAT AGTGCATCCG GTTGTCAGGA TTACAGTAAT
TTCGGTTATG CATCTACTGT CGCTTTGACG CTTGAATACG ACAACTACGT TTCGGGCTGG
CATTCGTCAG CGGTAAGGGA TATTGACGGA TCGTTCAAAG TATGGGGGGA ACTTTCGAAG
GCGGATGGCG CGGGCGCCCA CCTTATTCCC AGAGAAGTAA ATGCAACCAA CTACCCAGGA
CTCACCGGTG CCCCGTTAAA AATGGGCATT GGGTCGGCAA GTCGCAACAC TGTGCAGTAC
GTCCTGCTTA CCAGCGATAA CAAACTCTGG GTTTGGGGCC GGGCGGGGGC CGTCGTAGAT
GCCGCTTTGA CGAACAATGT AAACAATGTG ATTGTGGAAA CCGGACAGCC GGCTGTGAAT
GTCACTCCAT TCCAGCAATT GTCCATCGGT CTTCCGGCAG GGGTTACGGC AGCAAATGTT
AAAATGATGT TTGTTACCTC CGGTTCGATC GTGATCACCA CCTGCGGTGA CGGAAGGGTA
TACACCCTGT CTCAAAGTTC GTGGGTTCGG GGGGTAATCG GTGGGAATAG TTTATCCTGG
AACGTAGTGC AAAAGGAATC GGGAGGTGAT CTCACCGATA TAGTAGCCGC CAGGGGTTCA
CGTTCCGGCG TGATTGCCTT GGATAATTCC GGCAACCTCT GGGTTTATGG TGCAAATTCC
TGGGATGGCA TCGCCACCGC GAGCGCGAAC CGGTCAAGGG CTGTTCCCCA GGCTCTGCCA
CCTGCCGGTG CCGGCGCGAA AATTAAGATG ATTGGCACGA CCAACGCGTT TACCAACACC
GTCACCCATT ACGTGCTGTA CGAGGATGGC AGGTTATTCG CCCTGGGCGC CAACGACCGG
AAACAGCTTG GAAACTGGGA CCCGGCCAAT GCAAATCAAG CCACCTGGAC ACAACCGCGC
TATACCTCGG CCGCGGGGCC GGTCATGAAT GACATCAAAT GGATATCGCC GCAGGAACAC
GACGGGCTTT ATGGTTTTAT TAATGTATTG ACTAACGGTC AAAAGATATT TAACTGGGGA
CAGGAAAGTG GTTATGCCCT TGGACGAGGC GTGCACGCGA GTGTGAGCGG CTCTACACCC
GTGGATCCGG GAGAGCCGGC CAGCTTTGAG GCAGGTTATG CGAATTCCGA AATTATCTCG
CTTGAATCGG GAGGCCATAC TACCATGATG CTCCGCGAAT GCGAAGACGA CTTTGGCTAT
ATAGGTCACC GCATTCATGG CAGTATGGGC GACAATATCG ATACCGATGT TACCGACAAT
ACCGTGCACT TCCGCACCAG TGCGGTCCAG GTGTGCGGGG CTGTTACGAC CGACGCCAGC
CTAACGGTGT CTTCACCAGG GCCCTTTCTG TCCGGCAGCT CTGTTACATT CGTGGGGGCA
CCATCCGGCG GAACGTACGC CATCGACGCC AGCCTCACCA CGGCTGCCGG TGCCACCATC
AACCCTGTTA CCGGGGTAGC CAGCATTCCA TCGGCTGGTA CATTGCGTGT AAATTATACC
ATCAACAGTG CTACCTGCGG TGCCGTGGTC GTGAACCAGC TCGTCAATGT GGAACGTATG
ATAAGCATAC CGGGCAATGT CTGGATAGAC GCGAACGGTG ATGCGATTGT GGACGGTACT
GAAAGCGGGA CTGCGAACGG CTTCTGGGCC AATCTGCTCG ACCCCCAGGG CAATGTGGTA
GCATCGGTGG AGGTGGCAGC CGACGGTTCT TATAACATCG AGGTACGCAG TGGCTTGCTC
ACCAGCATTG GAGATTATTC GGTGGTGCTG ACGAACGGTA GCCGGAATAT TGGCGACATT
GTTACCGCTT CGGATACGCC CCTGAATGGC TACGGGTACA CTGGCACCAA CCGGGGCGGC
ACTACTTCTG TTGCGCCCTC GAATAATACA GGAGCAGTTA ATTTGGGAAG CCTGAATACG
CTTCCGGTTA CTACAACTGC TTTGGACCCT GTTAATTTCG GTATTCAAAC GCCGCCCGTG
GCAGACCCCA AGAGTTACTC CGTGCCAAAC AGCGCATTTA GTGCGACACC TCCCGCTGCG
TTTCCGGTAA ACGCGGGCTA TCAGTCTATC CCAGCATCGT CATCGAGCCT GACCGGCTAT
ACGACCGGTG GTTCGCTTTC AGGTTCGGAT GCGGAAGATT GTGCGGCTGC AGGCACGTGC
GCCACCGGAA CTTCGACCAC ATTTTCTATT CATACCATCA ATGCGAATAC CCTGGTGTAC
TATGACTTCG GTGGAGCGAC AGGCATTCAG CAGATAGACG TATCCGGCGG TCCCGTGACG
ATCCCTGATT TCAATGTGAA CAGTCTGGTA ATCTATGGGA AAGTAGGAAG TGGTACGGCC
GGAAGCGAAT TTGGTTTTAT CTATTCAATG ACCGACGAGG CGGGCACAAC CAGTACCCCT
GTGGCTTACA CCATTGCAAC CGAATCCGCA TTGCCCGTAA CGCTGATCAG CTTTGAGGCT
TCCACTGAGA TGAACACCGT GCATTTGGCC TGGGCTACGG CTAGCGAAGA AAATAGCAGA
GGCTTCGAAA TTGAGCGTAG TACCAACGCC TCTGACTGGA CGAATATAGG TTTTGTAGCG
TCACAATCAT CTGAAACCGG CAGTGCAAGC CGACTTGATT ATTCTTTTAC GGACACTTCC
ATACGCAAAG GAATAAGCTA CTATCGTCTG AAGATGATCG ATCAGGACGG AACGTTTGCG
TACAGCCAAA TCCGTTCAAT TCGCGTGGAC GGGGGCGATC AGCCCCTTGT TTATCCGAAC
CCGGTCGCTG ACGGCGAACT TACCATCGGG CCTTCGGCGC CCGGCCCACA CAGGGTTGAA
GTTAGTAACC TTGCCGGGAT CCGTGTCATG CAACTTCATT CCGGCGACCA TCGCCGGCTC
GACGTACGCA GATTAGCCAC GGGAATGTAC ATTTTGCGGG TCACTTATGC CAGTGGAGAA
ATGCAAAGCT GCACTTTCTT CGTAAAATAA
|
|---|
| Protein sequence | MKSNFTVLTR GLLWFLLLSA KSLFAQLGCY SASGCQDYSN FGYASTVALT LEYDNYVSGW
HSSAVRDIDG SFKVWGELSK ADGAGAHLIP REVNATNYPG LTGAPLKMGI GSASRNTVQY
VLLTSDNKLW VWGRAGAVVD AALTNNVNNV IVETGQPAVN VTPFQQLSIG LPAGVTAANV
KMMFVTSGSI VITTCGDGRV YTLSQSSWVR GVIGGNSLSW NVVQKESGGD LTDIVAARGS
RSGVIALDNS GNLWVYGANS WDGIATASAN RSRAVPQALP PAGAGAKIKM IGTTNAFTNT
VTHYVLYEDG RLFALGANDR KQLGNWDPAN ANQATWTQPR YTSAAGPVMN DIKWISPQEH
DGLYGFINVL TNGQKIFNWG QESGYALGRG VHASVSGSTP VDPGEPASFE AGYANSEIIS
LESGGHTTMM LRECEDDFGY IGHRIHGSMG DNIDTDVTDN TVHFRTSAVQ VCGAVTTDAS
LTVSSPGPFL SGSSVTFVGA PSGGTYAIDA SLTTAAGATI NPVTGVASIP SAGTLRVNYT
INSATCGAVV VNQLVNVERM ISIPGNVWID ANGDAIVDGT ESGTANGFWA NLLDPQGNVV
ASVEVAADGS YNIEVRSGLL TSIGDYSVVL TNGSRNIGDI VTASDTPLNG YGYTGTNRGG
TTSVAPSNNT GAVNLGSLNT LPVTTTALDP VNFGIQTPPV ADPKSYSVPN SAFSATPPAA
FPVNAGYQSI PASSSSLTGY TTGGSLSGSD AEDCAAAGTC ATGTSTTFSI HTINANTLVY
YDFGGATGIQ QIDVSGGPVT IPDFNVNSLV IYGKVGSGTA GSEFGFIYSM TDEAGTTSTP
VAYTIATESA LPVTLISFEA STEMNTVHLA WATASEENSR GFEIERSTNA SDWTNIGFVA
SQSSETGSAS RLDYSFTDTS IRKGISYYRL KMIDQDGTFA YSQIRSIRVD GGDQPLVYPN
PVADGELTIG PSAPGPHRVE VSNLAGIRVM QLHSGDHRRL DVRRLATGMY ILRVTYASGE
MQSCTFFVK
|
|---|
| |