| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0500 |
|---|
| Symbol | |
|---|
| ID | 8224067 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 560519 |
|---|
| End bp | 561541 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644928378 |
|---|
| Product | Luciferase-like monooxygenase |
|---|
| Protein accession | YP_003084934 |
|---|
| Protein GI | 255034313 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.715375 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TAGGTTTTTT GTCGTTCGGG CATTGGTCTA ACCACCCGGC TTACAACGCC
CGGACCGCCA GCGACACGCT GCTTCAATCC ATCGACCTTG CTGTGGCTGC CGAGGAAATC
GGGTTGGACG GCGCGTATTT CCGCGTGCAT CACTTTGCTG CGCAGCTCGC TTCGCCGTTT
CCGTTGCTGG CCGCTATCGG TGCCAAAACG AGCAAGATAG AAATCGGAAC GGGCGTGATT
GACATGCGCT ATGAAAATCC GCTGTACATG GTGGAAGACG CAGGCGCGGC CGACCTGATC
TCTGAAGGGC GATTGCAGCT CGGCATCAGC AGAGGGTCGC CGGAGCAGGT GATCGATGGC
TGGCGCTATT TCGGGTATGA GCCCGAGCAG GGCGAAACCG ACGCGGATAT GGGACGACGG
AAGGCACTGG AGTTTCTGGA AAGGCTCAAT GGCGTGGGAT TTGCCGAGCC GAACCCCTAC
CCCATGTTTC CGAACCCGCC TGGCCTGCTG CGCGTCGAAC CTCACTCGGA AGGACTGCGC
GAACGCATTT GGTGGGGCGC CGGCTCCAAC GCTACGGCCG TCTGGGCCGC TGAAAACGGG
ATGTACCTGC AAAGTTCGAC GCTTAAAAAC GATGAAGGCG GCAAGCCGTT CCATGTCCAG
CAAGCCGAGC AGATCAGGTT ATACAAGGAG GCCTGGAAAA AAGCGGGTCA CCAGCGTGAG
CCGAGGGTTT CGGTGAGCCG GTCTATTTTC GCATTGGTGA CCGACCAGGA CCATCGGTTC
TTCGGGCAGG AAGCCGGCAG AACCGATAAA ATCGGAACGA TCGAACCGGG CAAACGGGCC
ATTTTTGGTC GGAGCTACGC CGCCGAGCCG GATCAGCTCG TGAAAGAGCT GGCTCAGGAC
GAAGCCATCC AGGAAGCGGA TACGCTGCTT TTAACCATTC CGAACACCCT CGGTGTCGAT
TACAACATTC ATGTGCTGTC TTCTATTTTG AAATACGTGG CCCCGGGCCT GGGCTGGCGC
TAA
|
|---|
| Protein sequence | MKKIGFLSFG HWSNHPAYNA RTASDTLLQS IDLAVAAEEI GLDGAYFRVH HFAAQLASPF
PLLAAIGAKT SKIEIGTGVI DMRYENPLYM VEDAGAADLI SEGRLQLGIS RGSPEQVIDG
WRYFGYEPEQ GETDADMGRR KALEFLERLN GVGFAEPNPY PMFPNPPGLL RVEPHSEGLR
ERIWWGAGSN ATAVWAAENG MYLQSSTLKN DEGGKPFHVQ QAEQIRLYKE AWKKAGHQRE
PRVSVSRSIF ALVTDQDHRF FGQEAGRTDK IGTIEPGKRA IFGRSYAAEP DQLVKELAQD
EAIQEADTLL LTIPNTLGVD YNIHVLSSIL KYVAPGLGWR
|
|---|
| |