| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0495 |
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| Symbol | |
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| ID | 8224062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 554524 |
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| End bp | 556164 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644928373 |
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| Product | PepSY-associated TM helix domain protein |
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| Protein accession | YP_003084929 |
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| Protein GI | 255034308 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0449132 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCCTA GGAAGTATAA TATCTATTTT CATACGCATA CCATCAGCGG GATCATCATT
GCGGCCCTGC TGTATGTGAT ATTCTTTGCC GGCTCTTTTT CTTTCTTCAA AGACGATATC
GCGGCGTGGC AAAAGGGACG GTCCGAAGTG GCCCGCGATT TTGATCCACC CTACAACCAC
CTGCTCGATT CGCTGTCGCA GCATTATAAC CTCCGCGGCC GGAATTTCAA CTTCTATTTG
CTGCGGCAAG GCCAGGGAAG CTATGTGGAC ATGAGCGTAT CACAGGACAC GACCGTGAGC
AAGCCGAAAC CCAAGCCCCA AAAGGAAGAA CGCAGAAGGG GCAGAGGGAG ACGGGACAAT
GACGATTCGG CCTACTTCCG CTACCATTTC TCCGACAAAA AAGCCGGTGA TTATTCCGAC
AGTTACGACA TGGCCGAATT CCTCTACCGC CTGCACTTTC TGGCGCAGCT CAACCAGGTA
GGGATCAATA TCGGAACGCC GTTCGGTTAC CTGGTGGCCG GGATCGTCGC ATTTCTGTTC
CTTTTTGCGC TCATTACGGG TTTGCTGCTG CATTGGGACA AGATTAAAAC CAATTTCTTC
CTGTTCAGGC CGATGAGCAA ATGGAAGACC GTCTGGACCG ACATGCACAC CGTGCTGGGC
GTGATCGGCT TTCCGTTCCA GCTAATATTT GCTGTGACGG GCGTGGTCCT GATTGTCAAC
TACGTACTCC TGACGCCATT CGCGAACCTG CTTTACAACG GCGACAGCGA CAAACTGTAC
GAGAGCCTGC AATACAACCG CAGCGTGAAG GTGGATTACA CCTACAAGCC GATGAACGGC
ACGTTCGATA TGGACGCCAT GGTGGCGCGT TGGCAAAATG AATGGAAGGA CAGCCAGATT
ACCCGCATTT ACATCCGCAA TTACATGGAT GAAAGCATGC AGGTGAGCCT CGAAGCCAAG
CCGAACCCCA ACGCAAACTT CGCCGGCTCC GGCTATGCGA CGGTGCATGT GCCCAGCGGC
AAAGTGCTGG AAGAGAAATC ACCCAACGCA GGCGGCAATT ATATCGATAC GGTGAAAAGC
CTGGTATATC ATCTGCATTT CGGCGACTTC GGCGGCACGC CATTGCGGAT CGTGTTCTTT
TTGCTGGGGC TAATGGGCTG CGCCGTCATC ATTTCGGGCA TTATGATCTG GCTCGTAGCA
CGCGACAAAG TTGCGACGGA GCTGCGGAAG CGTAAATTCA ACTTCTGGGC GAGCAACTTC
TTCCTGTCGG CCTGCCTGAG CATGCTCCCG GTCACGGCAT TCACATTTAT CATGATCAAA
ACGCTCACGC ACGTGGACCA ATCGGTGATT TACAACACCT ACTTTTACAG CTGGCTGGTG
CTGGGCATTT ACCTGATGGC CCTGCGCAAC CTCCCGCAAA TGAACCGCCA CACGCTGCTG
CTTTCCGCGG TCCTCTGCAC AGGCGTACCC ATCGCCAACG GCATGGCCAC GGGCCTCTGG
ATGTGGACGA CATGGAGCCA GGGCGCTTTC GATATATTTT TTATAGACGC ATTATTCCTC
GTGCTGGCGG GCTGTTCGGC ATATGCGTAC ACGCGGGTGA ATGTGCAAGC GAAGCCTTTT
CAGGTGTTGG GGAGAGCGTA G
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| Protein sequence | MDPRKYNIYF HTHTISGIII AALLYVIFFA GSFSFFKDDI AAWQKGRSEV ARDFDPPYNH
LLDSLSQHYN LRGRNFNFYL LRQGQGSYVD MSVSQDTTVS KPKPKPQKEE RRRGRGRRDN
DDSAYFRYHF SDKKAGDYSD SYDMAEFLYR LHFLAQLNQV GINIGTPFGY LVAGIVAFLF
LFALITGLLL HWDKIKTNFF LFRPMSKWKT VWTDMHTVLG VIGFPFQLIF AVTGVVLIVN
YVLLTPFANL LYNGDSDKLY ESLQYNRSVK VDYTYKPMNG TFDMDAMVAR WQNEWKDSQI
TRIYIRNYMD ESMQVSLEAK PNPNANFAGS GYATVHVPSG KVLEEKSPNA GGNYIDTVKS
LVYHLHFGDF GGTPLRIVFF LLGLMGCAVI ISGIMIWLVA RDKVATELRK RKFNFWASNF
FLSACLSMLP VTAFTFIMIK TLTHVDQSVI YNTYFYSWLV LGIYLMALRN LPQMNRHTLL
LSAVLCTGVP IANGMATGLW MWTTWSQGAF DIFFIDALFL VLAGCSAYAY TRVNVQAKPF
QVLGRA
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