| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0488 |
|---|
| Symbol | |
|---|
| ID | 8224055 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 550464 |
|---|
| End bp | 551612 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644928366 |
|---|
| Product | beta-lactamase |
|---|
| Protein accession | YP_003084922 |
|---|
| Protein GI | 255034301 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAAC TGTTTACCTT AGTTTTTGTT CTTCTTGCGG TTTTTTCTTG CGGACAAAAG
AATACCCCTC AGCCATTGCC CGATGACCCA AACGACGGGA TCGACACGGG TTGTAAAACT
TGTGCCGGCA GCGGTTTTTC AGAACTCGAT TCAACGCCCA TTCCCATTGC CGACCGAGAT
ATCAGGAGTA TTTTCTTTCA GGATGGCGAG GCAGGCAACC TGCCCAATCT TTCGCCGTAC
AAATACCGGA ACCGCCTCGA TTTTTACAAC TTCCTGAAAT CGCACGCGAA AGATTACGAT
AACGACCTGA TGGTGTACAT CGGTCGCCGC GATACGACCG AGTTTTGTTT CCGGCAGGGG
AAATACAATG CGGATACAAA GCTATCGATC ATGTCAGCCT CGAAGGCTGT GACGGCCGCG
GTGATCATGA GCATTGTAGA GTCGGGGAAG CTTACGCTGG ACGACAAGGT GAGCAAATAC
ATTCCTTCTT TCAACAACGA GAAGAAAGAA ATTACGATCC GGCAGCTGCT CTCGCACACG
TCGGGGATTG TGGTGGAATC GCGGTTTGAC AGCCGCCGCG ACCTCACACT CGCCCAGAAT
ATCGACAGCA TTGCCGTTCG CACGCAGCTG CTTTTCACGC CGGGCAAGCA GGCGCTTTAC
GGCAGCGTGA GCTACGGCGT GGCGGCTCGG GTGGCCGAGG TGATCGAGAA GAAAACCTGG
GCACAGATAT TCCAGGAGCG GATCGGTTCG AAATGCGGGA TGAAAGATGT GGTATACAGT
CCCGAACACC CGCTGAACCC GGAGCCGGGC TATGGGATCA TTTGCTCGAT GAACGAATAC
CTGCGCTTTC TCACGATGAT TTACAACAAG GGAACCTACA ATGGCGTGCG CATCCTTAAA
GCGGAGTCGA TAGCGATTAT GGAGCAGGAT AATACCAATA AGGTTGACCC AACCTATGGC
CTGGGCCTGT TCCGGTATGA GATCCAGAAC GGCGTTTCCA CGGAGGTGGC CTGCCTGAGC
GCCCGCGGCG TACATGCCTG GGTGAACCGT TCGAAAAACT ATTACGGGCT GATCTTTACG
CAGGCCGGTT TTGAAAAAAC GATTTTGACC AACCTGGCTT TCAGGGACCT GGTGCGCCGG
AAGCTGTGA
|
|---|
| Protein sequence | MKQLFTLVFV LLAVFSCGQK NTPQPLPDDP NDGIDTGCKT CAGSGFSELD STPIPIADRD
IRSIFFQDGE AGNLPNLSPY KYRNRLDFYN FLKSHAKDYD NDLMVYIGRR DTTEFCFRQG
KYNADTKLSI MSASKAVTAA VIMSIVESGK LTLDDKVSKY IPSFNNEKKE ITIRQLLSHT
SGIVVESRFD SRRDLTLAQN IDSIAVRTQL LFTPGKQALY GSVSYGVAAR VAEVIEKKTW
AQIFQERIGS KCGMKDVVYS PEHPLNPEPG YGIICSMNEY LRFLTMIYNK GTYNGVRILK
AESIAIMEQD NTNKVDPTYG LGLFRYEIQN GVSTEVACLS ARGVHAWVNR SKNYYGLIFT
QAGFEKTILT NLAFRDLVRR KL
|
|---|
| |