Gene Dfer_0405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0405 
Symbol 
ID8223971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp465985 
End bp466719 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content58% 
IMG OID644928282 
Productstationary-phase survival protein SurE 
Protein accessionYP_003084839 
Protein GI255034218 
COG category[R] General function prediction only 
COG ID[COG0496] Predicted acid phosphatase 
TIGRFAM ID[TIGR00087] 5'/3'-nucleotidase SurE 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATCC TGGTAACGAA CGATGATGGA ATATACAGCC CGGGCATTGC AGCGCTCGCC 
AAAATCGCGG CGCGGTTCGG AGAAGTGAAA ATTGTGGCAC CCGATGTGGA ACAATCCTCT
ATGGGTCATG CCATTACGGC TTCCAGGCCG CTGTCCTACA AAAAATCGCC CATCGAGTTC
GAGGGCATCG ACGCCTACCG TGTAAACGGT ACGCCCGCCG ACTGCGTGGC GCTCGGACAA
CACCTCTGGG ACAAGCCCGA TGTGGTGCTC TCGGGGATCA ACCTGGGGCC AAACCTGGGG
AATGCGATGT GGCATTCGGG CACACTGGCC GCAGCCAAGC AGGCCGTTTT GTTCGGCATT
AAAGGCATTG CATTGAGTAC CCCTACGGAC GTTGAGCCCG ATTTTGAGAA ACTCGACCCA
TTTGTGGAAA AGGCACTGGA CCTGCTGTTC AAGAACCCGC ACCTGAACCT GGTGAATGTG
AATTTTCCGC ACAGCCCGAA AGGCGTGCGC TGGACGCGGC AGTCGGTTCG GCTTTACGAC
AATAACATTG TCCCGGCCCT CGACCCGATG GGCCGCAAGC ACTACTGGTT CACCGTCGTG
CCGCTCGAAC CGGCAGAAGA AGGCACCGAC CGCTGGGCGA TCGAAAACAA CTTCGTGTCC
ATCACCCCGC TCCGCCTCGA CCTGACCAAC GAGGCCGAAC TGGTGAAAGC GCAGCTCGCC
TACCCGATTA CCTAG
 
Protein sequence
MRILVTNDDG IYSPGIAALA KIAARFGEVK IVAPDVEQSS MGHAITASRP LSYKKSPIEF 
EGIDAYRVNG TPADCVALGQ HLWDKPDVVL SGINLGPNLG NAMWHSGTLA AAKQAVLFGI
KGIALSTPTD VEPDFEKLDP FVEKALDLLF KNPHLNLVNV NFPHSPKGVR WTRQSVRLYD
NNIVPALDPM GRKHYWFTVV PLEPAEEGTD RWAIENNFVS ITPLRLDLTN EAELVKAQLA
YPIT