Gene Dfer_0390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0390 
Symbol 
ID8223956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp445564 
End bp446145 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content58% 
IMG OID644928267 
ProductCheB methylesterase 
Protein accessionYP_003084824 
Protein GI255034203 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG2201] Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.904663 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.342952 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGAAA ATCATGTAAA ACACGCCTGC CAGCTTCTGC TGATCGGCGG CTCGGCCGGC 
AGCCTTGAAG TTCTCTTCAA ACTCTTTCCG CTGCTGCGCG CTGATTTGCC GTTTCCCGTG
GCCCTGGTAC TGCACCGCCG CAACTCGGGC GACTCGTCGC TGTCCGATCT GCTCGCTTCC
AAAACCCTGA ACCCCACCCA CGAGGTAGAA GATAAAGAGC CGGTAGAGCC CGGGACCATT
TACCTCGCGC CGGCGGATTA CCATTTGCTT TTCGAACACG ACCGCACATT CTCGCTCGAC
TACTCCGAGA AAATCCATTT CAGTAGGCCC AGCATCGACG TCACCTTCGA ATCGGCGTCG
GAAGTGTATG GCGCGGGGCT TGTAGCGCTC CTGCTCTCGG GGGCCAATGA AGACGGTACC
GCGGGCCTGC AAGCCGTGCA ACGGGAGGGC GGCAGAGCGG TGGTTCAAAA CCCCGAAACC
GCGCAAATGC CCTTCATGCC TAACCACGCC ATTACGCACA TGGCCGTCGA CCACGTTCTC
GACATTGTCG GAATGGCCAA TTTCATCAAC GCGCTGGAAT AG
 
Protein sequence
MEENHVKHAC QLLLIGGSAG SLEVLFKLFP LLRADLPFPV ALVLHRRNSG DSSLSDLLAS 
KTLNPTHEVE DKEPVEPGTI YLAPADYHLL FEHDRTFSLD YSEKIHFSRP SIDVTFESAS
EVYGAGLVAL LLSGANEDGT AGLQAVQREG GRAVVQNPET AQMPFMPNHA ITHMAVDHVL
DIVGMANFIN ALE