Gene Dfer_0319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0319 
Symbol 
ID8223885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp363566 
End bp365707 
Gene Length2142 bp 
Protein Length713 aa 
Translation table11 
GC content54% 
IMG OID644928197 
Producthypothetical protein 
Protein accessionYP_003084754 
Protein GI255034133 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.503952 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.313139 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACATC CTATACTATT GTTTAGATAC ATATTTCCAA TTCTGCTCCT GCTCAATATC 
GGCTCCGGCG TAACCCAGGC ACAGGACCGC TGCGGCTCAA TGGAATTGCT TCAAAAGCGG
TTTACCGATA AGCCGGCCCT CAAATTAATG TTTGATCAGC GGGACGAGCG CATCCGGCAA
ATGGTCAATG CGAGAATGGC GTCCGGCAAA AGCCTGCGTA CCACCGGCCC TGTTACCATT
CCGGTGGTTT TTCACGTGGT TATGAACCGC CAGTCGCTCG TGACCGACGC CCAGATCATG
GCGCAGCTCG ATACCATTAA TAAGGACTAT GCCGGTACCA ACGCCGGTGC TTCGAAAATC
CCGTCGCATT TCAGGTCACT TTTCGGGCAG TCGGGCATTC AATTCTGCCT CGCCCAGCGC
ACGCCCAATG ATGCGCCCTC GACGGGGATC GTGCGTTACA CCACCACGCG CACGTCGTTC
GACTACACTA CCAACCAGGT GAAGCATGCC GAATCGGGAG GTGCCGATGC CTGGGATACG
GATAAATACC TGAATATCTG GATCTGCGAC TTATCGGGAA GCACATTAGG CTACGCCACA
TTCCCCGACG ACGGCGTAGA AGACGAGCAG GGCGTGGCTG TCGACTATGC CTCGCTGCCT
GGGGGAAGCG CAGCAGGCTT TAACCAGGGC AAGACTTTGA CACACGAACT GGGCCATTAT
TTCGACCTCT ACCACATTTG GGGTGACGAT AACGGCTCAT GCACGGGAAG CGACAATATT
GATGACACGC CCAACCAGAG CAACAGCACT ACCTCCTGCC AGACAGGCAT CGTAACCGAC
CGCTGTACCC CCACGGCGCC CGGCATCATG TATCAGAATT ACATGGATTA CACTCCTGAT
GCGTGCCTGT ATATGTTTAC CAAAATGCAG GTGGCGCATA TGGAGGAAAT TTTTACTACT
TACCGCTCAT CGCTTTTACT CTCCAATGCC TGCACGCCCG TCGACGTAAA GAAAAAAGAC
GCTTCCCTGA AAGCGATCCG CCAGCCCGCG CAGCGCATTT GTACCAATAC TCTCACGCCG
CAGGTAACAT TAGTAAATCG CGGCAGCGAA ACGCTTACGT CGGTAACGAT TCACGCGGTG
ATCGACAACG GCACCGTGCA AAACTTTAAC TGGACGGGCT CGCTGGCCAC TTATGCCGAA
GCCACGGTGA CATTGCCGCA ACTCACCACC GTTGAAGGCA ACCACGTTCT GAGCATTTAC
ACCTCCAACC CGAACGGCGC CGCCGACCAG GACACTTCCA ACGACGCGCT GAGCCTCGAC
TTCATTTACT ATGAACCGTT TGCTGCGCCC GTGCAGGAAA GTTTTGAAGG GCTGTTCCCG
CCGCAAGGCT GGGATATCGT GAACGAAGAT GGCGGCTCGA CCTGGGAAAA AACCACTTCC
GCGGCCAAAA CGGGCGGCGC TTCCGTGAAG ATCGCGAATT TTGATAACCA GCTCGTCGGC
CAGCGCGATT ACCTGCGGTC GCCGACGGTG AATATTGCAG GTGCCGACTC GGCATTCGTA
TCGTTCCAGG TAGCGGCGGC AACGTATACC AACGCCTCCG CACAGGGCAA TGTGTGGGAT
ACATTGCAGG TGCTTATTAG TACAGATTGC GGACAGACTT ACACAAGTGT CTACAAAAAA
TGGGGATCGA CGCTCGTTAC CCGCAATACA GCCACCCGCA CCGCATTTAC GCCGGGTGTG
AACGAATGGA GGCGTGAAGA AATCAATATC GGCCGGTTCA TCGGTCAGGG TGAAATACTT
GTTGCTTTCC TGAACACAAA CGGCAACGAA AACGACATTT ACCTCGACGA CATCAATATC
CGCACAGTCA CCATCAACCC GAACCTGAAA GAAGCGGGTT TCCTGGTAAC GCCCAACCCA
ACGAGCGGAC AGGTATCGGT ACAGTTCTAC CCGCATCCGG AGCAACTGAA ATCGGTGTCC
ATTTACAACG TAGCGGGCCA GAAAGTGGCC GAAACCGTCA TCACCGGCGA AGTAGCATCA
AATGTGTATG ATTTTGACCT GACAAGGTTC GCGGCCGGCT TATACGTGGT AAAAGCACAA
TTCGAAGGCC GCGTGCTGAC GAAGAAGATT GTAAAGAATT GA
 
Protein sequence
MRHPILLFRY IFPILLLLNI GSGVTQAQDR CGSMELLQKR FTDKPALKLM FDQRDERIRQ 
MVNARMASGK SLRTTGPVTI PVVFHVVMNR QSLVTDAQIM AQLDTINKDY AGTNAGASKI
PSHFRSLFGQ SGIQFCLAQR TPNDAPSTGI VRYTTTRTSF DYTTNQVKHA ESGGADAWDT
DKYLNIWICD LSGSTLGYAT FPDDGVEDEQ GVAVDYASLP GGSAAGFNQG KTLTHELGHY
FDLYHIWGDD NGSCTGSDNI DDTPNQSNST TSCQTGIVTD RCTPTAPGIM YQNYMDYTPD
ACLYMFTKMQ VAHMEEIFTT YRSSLLLSNA CTPVDVKKKD ASLKAIRQPA QRICTNTLTP
QVTLVNRGSE TLTSVTIHAV IDNGTVQNFN WTGSLATYAE ATVTLPQLTT VEGNHVLSIY
TSNPNGAADQ DTSNDALSLD FIYYEPFAAP VQESFEGLFP PQGWDIVNED GGSTWEKTTS
AAKTGGASVK IANFDNQLVG QRDYLRSPTV NIAGADSAFV SFQVAAATYT NASAQGNVWD
TLQVLISTDC GQTYTSVYKK WGSTLVTRNT ATRTAFTPGV NEWRREEINI GRFIGQGEIL
VAFLNTNGNE NDIYLDDINI RTVTINPNLK EAGFLVTPNP TSGQVSVQFY PHPEQLKSVS
IYNVAGQKVA ETVITGEVAS NVYDFDLTRF AAGLYVVKAQ FEGRVLTKKI VKN