| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0291 |
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| Symbol | |
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| ID | 8223857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 329321 |
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| End bp | 330238 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644928169 |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003084726 |
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| Protein GI | 255034105 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.102645 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGCC GAGACGCATT ATCTTCGATC GCTGCCGTGG GCGCAGCGGG CATTGTTCCC
GCCGAAGCCG CCAGGGCCAA AGTACAGCCA TTTATTTACT CCCTCAATAT GAGCACCCTG
CGCGGCCAGA AACTGGGCTT CCGCAAGGAA CTGGAAATGG CCGCGAAGGC AGGTTATGGT
TCGGTCGAGA TATGGATCAG CACTTTGCAG GATTATCTCA AAGGCGGCGG TACATTGCAG
GAAGCCAGGC GGATTATCAC TGACCTGGGC CTGAAAGTGG AGGATGCCAT TGGTTTCGCG
ACCTGGATCG TCGACGACGA GGCCGCACGC GCGAAGGCAT TGGACCAGCT GAAAGGTGAA
ATGGAGCAAC TTGCGGCCAT CGGCTGCCCG CGCGTAGCCG CACCGCCCAT GGGCGCAACA
ACCGGCCCGT CGCTGGACCT GGCCCGGGTA GCCGAACGCT ACCGGGCGAT CCTCGAACTG
GGCGACAAAA CCGGCGTGGT ACCGCATTTG GAACTGTGGG GTTTTTCCAA AAACCTGAGC
CGCGTGGGTG AAATCCTGTA CGTGGCCGTG GAATCGGGGC ACCCATCGGC CCGCTTGCTC
ATGGATGTGT ACCATTTGCA CAAAGGTGGC TCAGGAATGG ATGCGATTAA AGATGTAGGC
AAGCCTCTCA TCGAGATTTT CCACGTGAAC GATTATCCCA AAACGCCGCC GCGGGAATCC
ATCACCGACG CTGATCGGGT GTATGTGGGC GACGGCATTG CGCCCTGGAA GAATGTGGTG
CAGAGTCTTA AAAATCCGGA TAAGCCCATT ATCCTGTCAT TCGAAGTATT CAACAAAGAC
TACTGGGCGC AGGACGCATT GCAGGTGGCG AAGACGAGCC TCGCGAAGAT GAAGAAAATC
GTGGAAGCGG CGGTTTGA
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| Protein sequence | MNRRDALSSI AAVGAAGIVP AEAARAKVQP FIYSLNMSTL RGQKLGFRKE LEMAAKAGYG
SVEIWISTLQ DYLKGGGTLQ EARRIITDLG LKVEDAIGFA TWIVDDEAAR AKALDQLKGE
MEQLAAIGCP RVAAPPMGAT TGPSLDLARV AERYRAILEL GDKTGVVPHL ELWGFSKNLS
RVGEILYVAV ESGHPSARLL MDVYHLHKGG SGMDAIKDVG KPLIEIFHVN DYPKTPPRES
ITDADRVYVG DGIAPWKNVV QSLKNPDKPI ILSFEVFNKD YWAQDALQVA KTSLAKMKKI
VEAAV
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