Gene Dfer_0264 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0264 
Symbol 
ID8223830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp297886 
End bp299328 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content57% 
IMG OID644928143 
ProductFibronectin type III domain protein 
Protein accessionYP_003084700 
Protein GI255034079 
COG category[R] General function prediction only 
COG ID[COG3401] Fibronectin type 3 domain-containing protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.375315 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.632573 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCGT TTCGCCTGTT TGCGCTCACA TTACTTTGCA TTGGCCTCGT ATTTTCCCAC 
CGTGTCTGGG CCGCCATTCC AAAAGCGCCC ACCGCATTGA CCGCCGTAGC AACCACCTCC
GGCCAGATCA ACCTTGCATG GCTGGACGTT TCAACCGACG AAACAGGCTT TGAAGTAGAG
CAATCGACAG ACGGGACGAA GTTTGTGCGC GTGGCCGATT TGCCCGCCAA TGCGATTGTC
TATCAGGACA AATCCTTAAA ACCGGCTACA AAATACTGGT ATCGCGTCCG GTCGAAGAAC
GCTTCCGGGA ATTCAGCCTA TTCCAACATC GCCAATGCGA CTACGCTGCC GGTTACCATT
CCAAAAGCGC CTTCCGCGCT CGCGGCCACG GTGGTTTCCG CTACGCAACT AAACCTTACC
TGGACGGATA ATGCCACGGA TGAGACCGGC TTCGAGCTGG AACGCTCCAC GGATGCATTG
TCTTTTACCA AAATCGCCGA CCTCCCGGCC AATACGACCA CTTACCAAAA CACCGGTCTG
GCTCCCGCGA CGCGCTACTG GTACCGCGTA GCTGCCAAAA ATACCGCAGG AAAGTCGGCA
TACTCGAACA TCGCCAATGC GACGACCCTG CAAGTGGCGC CCAATGCTCC CGCAAACCTC
ACGGCTACCG ACGTTTCGAC TTCGCAGATC AATCTGAAAT GGACCGATAA TGCCAACAAT
GAAACGGGCT TCCAGATAGA ACGCTCCGCC GACGGAGCGG TTTTTACCAA AATTGCCGAC
GTAGCGGCGA ATGTGACGAC CTACCAAAAC ACCGGTTTGT CCGCAGCCAC ACAGTACCAT
TATCGCGTGC GGGCGGTGAA TGCGGTCGGC GCGTCGGTGT ACAGTAATAC CGCTTCCGCG
CGGACCCAGA ATGTGCCGGT GCCCAACGCC CCCGTGAACC TGACGGCCGT TCCCACCGCG
CCGGGCCTGA TACAGCTCCG CTGGGAAAAA CCTACCGGCA ATGCAACCGA TGTGGTGTTG
GAGCGGGCAA AAGGCGATGG TGACTTCGTG CAGCTTGTCA AATTGCCGGC CACAGTGCTG
CAATATGAGG ACAAATCCGG ATTCGAATCC GACGATTACT ATTATCGTAT CAAAGCGGTG
AATGCAGGTG GAGATTCGCC TTACAGCCTG GTGGCGATCG TGCGGGCGGC TTCGGTGATC
ACCAGCGTGG AGCCGGTATC CGGCAAGCAC CTGGTTTACG CCGCTGGGCG GACGCTCGTG
GTAGAACTCG GTCGCCCTGC GCAGGCCCAG CTTACGGTGT ACGATCAGTC GGGCCGGCTG
TACAAATCGC AGAAAATCGG GCGAAGCGCA CGTGTCGATC TGGCTATGCT GCCTGTCGGA
ATATACATTG TTGTAGCAGA AATAGGCCAG GACGTGCTAT CGAGGCGGAT TGTGCTTTAT
TGA
 
Protein sequence
MNPFRLFALT LLCIGLVFSH RVWAAIPKAP TALTAVATTS GQINLAWLDV STDETGFEVE 
QSTDGTKFVR VADLPANAIV YQDKSLKPAT KYWYRVRSKN ASGNSAYSNI ANATTLPVTI
PKAPSALAAT VVSATQLNLT WTDNATDETG FELERSTDAL SFTKIADLPA NTTTYQNTGL
APATRYWYRV AAKNTAGKSA YSNIANATTL QVAPNAPANL TATDVSTSQI NLKWTDNANN
ETGFQIERSA DGAVFTKIAD VAANVTTYQN TGLSAATQYH YRVRAVNAVG ASVYSNTASA
RTQNVPVPNA PVNLTAVPTA PGLIQLRWEK PTGNATDVVL ERAKGDGDFV QLVKLPATVL
QYEDKSGFES DDYYYRIKAV NAGGDSPYSL VAIVRAASVI TSVEPVSGKH LVYAAGRTLV
VELGRPAQAQ LTVYDQSGRL YKSQKIGRSA RVDLAMLPVG IYIVVAEIGQ DVLSRRIVLY