Gene Dfer_0246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0246 
Symbol 
ID8223812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp274569 
End bp275660 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content54% 
IMG OID644928125 
Productpeptidase T2 asparaginase 2 
Protein accessionYP_003084682 
Protein GI255034061 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1446] Asparaginase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAC TATCCCTGAC CCTACTGGCC GCGCTCTGCT GCATTGCGGC ATACGCACAA 
GATTCTTCCG ACAAGATTAC CCTCGTGATA CATGGCGGAG CAGGCACCAT CACCCGCGCC
AGCATGACAC CCGAACGCGA AAAAGCTTAC CGTGAAGGAC TCGATCTGGC CTTGCAGAAA
GGTTATGAAG TGCTCAAAAA CGGCGGCACG AGCGTACAGG CGGTGGAAGC AGCCATTCAT
GTCATGGAAG ATTCGCCGCT GTTCAATGCC GGCAAAGGTG CTGTGTTCAC CAATGAAGGC
AAAAACGAGC TGGACGCGGC CATTATGGAG GGCAAAACGC TGAAAGCCGG GTCGGTCGCT
GGTGTTACCA CCATTAAAAA CCCAATTTCC GCGGCTATTG CGGTGATGGA CAAATCCGTT
CACGTGATGA TGGCGGGCAA AGGCGCGGAG CAATTCGCCA AAGAGCAGGG ACTCGAAATC
GTCGATCCCT CCTATTTCCA CACCGACGTA CGCTACAAGG CATTGGAACG CGCGAAAGAA
CAAGAGAAAA CGGAGCTGGA TCATCATGGG AAGGAAGGTA AAAAAGCGGA TGGAGGAAAT
GACGAAAAAA AGATCAGGAC GGCCCCGAAA TCGGGACATA GGTCTGTGGA CGACCTGATT
TTTACAGAAG GAAAGAAGTT TGGGACGGTG GGTTGCGTAG CGCTGGACCG GTATGGTAAC
CTTGCTGCCG GCACTTCTAC GGGCGGGATG ACTAATAAAC GCTACGGCCG CATCGGCGAC
GCGCCCATTA TCGGGGCTGG AACGTATGCC AACAATGCCA CTTGCGCCGT GTCGGCGACC
GGCCATGGGG AATATTTCAT CCGCTCGGTT GTCGCGCACG ACATTTCGGC TTTGATGGAA
TACAAAGGTA TGAGCGTGGC CGACGCCGCG AATGAAGTGG TGATGAAAAA GCTCGTCGAA
CGGGGCGGAG AAGGCGGGGT TATCGCCGTG GACCGCAACG GCAACATCGC CATGCCGTTC
AACAGCGCAG GAATGTACCG GGGCTACATC AAAGCCGATG GCAAGCGCGA AATATTGATT
TATAGGGATT AA
 
Protein sequence
MKTLSLTLLA ALCCIAAYAQ DSSDKITLVI HGGAGTITRA SMTPEREKAY REGLDLALQK 
GYEVLKNGGT SVQAVEAAIH VMEDSPLFNA GKGAVFTNEG KNELDAAIME GKTLKAGSVA
GVTTIKNPIS AAIAVMDKSV HVMMAGKGAE QFAKEQGLEI VDPSYFHTDV RYKALERAKE
QEKTELDHHG KEGKKADGGN DEKKIRTAPK SGHRSVDDLI FTEGKKFGTV GCVALDRYGN
LAAGTSTGGM TNKRYGRIGD APIIGAGTYA NNATCAVSAT GHGEYFIRSV VAHDISALME
YKGMSVADAA NEVVMKKLVE RGGEGGVIAV DRNGNIAMPF NSAGMYRGYI KADGKREILI
YRD