Gene Dfer_0239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0239 
Symbol 
ID8223805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand+ 
Start bp266394 
End bp267035 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content57% 
IMG OID644928118 
Productorotate phosphoribosyltransferase 
Protein accessionYP_003084675 
Protein GI255034054 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0461] Orotate phosphoribosyltransferase 
TIGRFAM ID[TIGR00336] orotate phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.587181 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAACG ATCTGGATAT TACCAAACGA ATCGCCGAGC TGCTTCTCGA AGCACAGGCC 
ATCAAGCTAA GCCCCGAAAA GCCGTTCCAA TGGAGCTCAG GCTGGTTTTC GCCCATTTAC 
TGCGACAACC GCGTCGCATT GTCGTACCCC GACACGCGCA CGTTCATCAA AAAGGCGCTG 
GCCGGGGTGA TCCGGGAGAA ATACCCGCAT GCGCAGGCCG TGGTAGGCGT CGCGACCGGC 
GGTATCGCAC AGGGCGCATT GGTAGCCGAT CTGCTCGAAT TGCCGTTCGC CTACGTCCGA 
CCAGAGCCTA AAAAGCACGG AATGGGCAAC CAGATAGAAG GCAGGCTGGA AAAAGGCCAG 
TCGGTGGTAA TCATCGAAGA CCTCATCTCG ACCGGCGGAA GCTCCCTCAA AACGGTGGAC 
GCCCTGCGCG AAGCCGGCAT CGAAGTAGGC GGAATGGTGG CGATCTTCAC CTACGGTTTC 
CAGGTTGCAG CCGATAATTT CACCGCCAAA AATGTAGAAC TCCACACCAT CAGCAACTAC 
AACGCGCTGA TCGAAGTGGC ATTAGAGCAC AAATACGTAT CCGAAGCACA GCTGGAAAGC 
CTCGCCGCAT GGCGAGTAGC GCCGGAGGGC TGGGGGAGGT AG
 
Protein sequence
MSNDLDITKR IAELLLEAQA IKLSPEKPFQ WSSGWFSPIY CDNRVALSYP DTRTFIKKAL 
AGVIREKYPH AQAVVGVATG GIAQGALVAD LLELPFAYVR PEPKKHGMGN QIEGRLEKGQ 
SVVIIEDLIS TGGSSLKTVD ALREAGIEVG GMVAIFTYGF QVAADNFTAK NVELHTISNY 
NALIEVALEH KYVSEAQLES LAAWRVAPEG WGR