Gene Dfer_0223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0223 
Symbol 
ID8223789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp250309 
End bp251160 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content56% 
IMG OID644928102 
Productdihydropteroate synthase 
Protein accessionYP_003084659 
Protein GI255034038 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0294] Dihydropteroate synthase and related enzymes 
TIGRFAM ID[TIGR01496] dihydropteroate synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000034848 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0279297 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCAAG TTAGTAAAAA AACGCTCAAT ATCCGGGGCA CGCTGCTCGA TCTGTCGACG 
CCCGTGGTGA TGGGTATTAT CAATATTACG CCCGATTCGT TTTACGCCGG CAGCCGCGCC
GCCGCGACCG ACGAGATCGT CGAAAAAGCC GGCCAGATGC TGACCGACGG AGCCGGTATG
ATCGACATCG GCGGGTATTC CACACGCCCC GGCGCCCGCG AGGTGGGCGC GGAGGAGGAG
GCCGATCGCG TGGAGTCGGC GGTGGAGCCA TTAGCTAAAT TTTTCCCTGA TCTCATCATT
TCTGTTGATA CCTTTCGGGC CGGAGTGGCG GAAAGGGGCA TTGCCAAAGG CGCACATATT
ATTAATGACG TGGCCGGCGG CACGCTCGAT GACGCCATGT TCGAAACCGT TGCCCGCCTG
CGTGTGCCGT ACATACTCAT GCACATGCGC GGAACACCGC AAACGATGAA CCAGCTCACG
CATTATGACC GCCTCGTGCC GAACATCCTG CGCGACCTGC GCGTAAAAGT GATGATCCTT
CAAAGCAACG GCGTGGCCGA CGTGATCATC GATCCGGGTT TCGGTTTTGC CAAAACCATC
GCGCAGAACT TCGAGCTACT GCGGGCGCTG GACCAGTTCA AATTGCTCGG TTACCCGGTG
CTCGTGGGTA TCTCGCGCAA GAAGAAGATT TACAAAACAT TGAATATTTC GCCCGATGAA
GCGTTAAACG GGACAACGGT GCTGAACACG CTCGCATTGG AGCGGGGTGC TTCGATCCTC
CGTGTGCATG ATGTAAAACC GGCCGTGGAA GCGGTAAAAC TATGGATGGC CGCCGGTAAC
TATCCAAATT AA
 
Protein sequence
MLQVSKKTLN IRGTLLDLST PVVMGIINIT PDSFYAGSRA AATDEIVEKA GQMLTDGAGM 
IDIGGYSTRP GAREVGAEEE ADRVESAVEP LAKFFPDLII SVDTFRAGVA ERGIAKGAHI
INDVAGGTLD DAMFETVARL RVPYILMHMR GTPQTMNQLT HYDRLVPNIL RDLRVKVMIL
QSNGVADVII DPGFGFAKTI AQNFELLRAL DQFKLLGYPV LVGISRKKKI YKTLNISPDE
ALNGTTVLNT LALERGASIL RVHDVKPAVE AVKLWMAAGN YPN