| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0214 |
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| Symbol | |
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| ID | 8223780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 241055 |
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| End bp | 242173 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644928093 |
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| Product | DNA protecting protein DprA |
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| Protein accession | YP_003084650 |
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| Protein GI | 255034029 |
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| COG category | [L] Replication, recombination and repair
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake |
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| TIGRFAM ID | [TIGR00732] DNA protecting protein DprA |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0000401852 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0161041 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCACGTAT CTTCCGACGC AGAGAAAATC TGCATCCTAG CGCTTATGCA CACGCCCGGA
ATCGGGGCGG TGACGATCCG GCAACTGATC AGCTACTGCG GCAGCGCGTC CCAGGTTTTC
GAGTCCGACT ATCGGAAACT CATCAAAATC CCCGGCATCG GTGACAAGAT CGTGAAGGCG
ATTTTGAACA AATCCACATT GGAATATGCT GAAAAAGAGG TGGTACAATG CCAGAAGACA
GCCACCCAGC TGCTTTTCTT CACCGATCCC GACTATCCTG CAAGGCTCCG GCCGCTTTAC
GACGCCCCGA TCGCATTGTA TGCAAAAGGC AATACAAACT TCAACTGGCC GCGCACGGTG
GGCATTGTGG GTACCCGCAA AATCAGTGAA TATGGCAAGG CCGTTACAGA GCAAATCATC
CGCGACCTGG TGCCTTACCA GCCCCTCGTG GTGAGCGGAC TGGCTTATGG TGTGGATATC
ACTGCACACC GGCATTGCAT CCGGAACAAC CTCGCCACAC TCGGCGTGAT GGCGAGCGGT
GCGGATGTGA TCTATCCGGC GGTGCATCAG CGCACAGCTG CCGACATGCA GGCCAACGGC
GGCATCGTCA CGGAGAATGC GCTGGGTACG AAACCTGATT TTATGAGATT TCCCGCGCGC
AACCGAATTA TTGCCGGGCT CAGTGATGTT ACCATCGTAG TGGAATCGGG GCGGACGGGC
GGGAGCCTGA TCACGGTCGA ATTTGCGCAG AACTACCACC GGGAGGTTTT CGCCGTGCCG
GGGATGATTA ACGAGCCGCA GTCGGAAGGG TGTAATTATC TGATCCGGGA CAACAAGGCA
GCGATATTCA CGTCGGTGAC CGATATGGCG GAGGCATTGG GCTGGACAGC CGGCATGCCC
GAATCAGTTC CGGCCGAGGC GCAGCCGGTC AGTTTTGAGG GTTTTACGCA GGACGAAGGG
CAGGTGCTGG CATTACTGAA ACAGCACGGA CCGACGCAGA TCGACGAGCT GGCCTGGCAA
ACGGGCATCC ATCTGAATCG CCTCGCGTCG CTGCTCCTGA ACCTCGAATT CCAGGGAATG
GTCCGCTCGA TGCCGGGCAA GAAATACGGG TTGATTTAA
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| Protein sequence | MHVSSDAEKI CILALMHTPG IGAVTIRQLI SYCGSASQVF ESDYRKLIKI PGIGDKIVKA
ILNKSTLEYA EKEVVQCQKT ATQLLFFTDP DYPARLRPLY DAPIALYAKG NTNFNWPRTV
GIVGTRKISE YGKAVTEQII RDLVPYQPLV VSGLAYGVDI TAHRHCIRNN LATLGVMASG
ADVIYPAVHQ RTAADMQANG GIVTENALGT KPDFMRFPAR NRIIAGLSDV TIVVESGRTG
GSLITVEFAQ NYHREVFAVP GMINEPQSEG CNYLIRDNKA AIFTSVTDMA EALGWTAGMP
ESVPAEAQPV SFEGFTQDEG QVLALLKQHG PTQIDELAWQ TGIHLNRLAS LLLNLEFQGM
VRSMPGKKYG LI
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