| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0213 |
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| Symbol | |
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| ID | 8223779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 239124 |
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| End bp | 240947 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644928092 |
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| Product | glycoside hydrolase family 13 domain protein |
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| Protein accession | YP_003084649 |
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| Protein GI | 255034028 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR02402] malto-oligosyltrehalose trehalohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000901025 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0389775 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAACC TCGAAACCGA TGTAGCCGAA ACCGAGCAAC ACTATGAAGG CATGGGCGCA
ACCTGCCACC CCGACGGAGT TTATTACCGG GTGTGGGCGC CGCACGCAGA AAGCGTTTCG
GTCATAGGAA GTTTCAACGA CTGGGATTCG TCCGCCAACC CGCTGCAACC CGAAGAGAAC
GGAGTGTGGG GCGCACTAGT CGAAAATTCA AAAGAAGGAG ATGAATACAA ATTTTTCCTC
AAAACACCCG CCGGAGAGCT GCAACGCAAC GATCCGTACG CGCTTAAAGT AACCAATTCC
GCAGGCAATT GCGTGGTTTA CAATCACGAG TCTTTTGACT GGCAGGATGT GTCCTTCCAA
ATGCCCGGCT GGCATGAACT GGTCATTTAT GAAATGCATG TGGGCACTTT CAATGTTACG
GAGGAAGGTC AGGTCGGCAC ATTCTACACC GCTATCGAAC GCATCCCGTA CCTGAAAGAC
ATGGGTTTCA ATGCTGTTGA GCTCATGCCG TGCTCGGAGT TCCCGGGCGA TAAGTCGTGG
GGCTACAACC CCTCCAACCC GTTCGCGATA GAGTCCGACT ACGGCGGTCC CGATGGCCTG
AAAGCATTCG TGAAAGCGGC CCACGAGGCC GGCATCGCGG TGATCCTCGA CGTGGTGTAC
AACCATTTCG GCCCCTCCGA CCTCGACCTG TGGCAGTTCG ACGGCTGGCA TGAGAACGAT
GGCGGCGGTA TCTACTTTTA CAACGACTGG CGCTCCGAAA CCCCCTGGGG CAACACCCGC
CCCGACTACG GTCGCGGCGA AGTGCGCCAG TACATTCACG ACAATGCATT AATGTGGCTC
CGCGACTACC GCATCGACGG CCTCCGCATG GATATGGTGC CTTACATCCG CAATGTGAAA
GCGAATGGCA ATCCCGGCGA CGATATCCCC GAGGGCATTT CGCTTATGCA ATGGATCAAT
AAGGACATCC GCGACAGCTG CGCCAACTGC ATTACGATCG CCGAGGATAT GCATTCGCTG
GATTTTATCA CCAGCCGCGT GGAAGATGGC GGGCTTGGGT ATGGGTCGCA ATGGGATGCG
AAATTCGTGC ACACGATCCG CGACGCAATC ATCACCGCCA ACGACGAAGA CCGCGACATG
GAAGGCGTGG TATCCGCGAT CACAAGCCGC TACAACAACG ACTCGTTCCA ACGCATTATC
TACACCGAAT CGCACGACGA AGTAGCGAAT GGCCAGGCGC GCGTGGCCGA AGAGATTGCC
GACGGCGATG TGGACAACTG GTATTCCAAA AAACGCGCGG CGTTGGGCGT AGCGCTGGTG
CTCACCTCTC CCGGCATCCC GATGATTTTC CAGGGCCAGC CGCTGCTGGA AGACAAATGG
TTCTCGGACA GCGACCCGAT CGACTGGTCA CGTCTCGAAA AATTCAGCGG ATTCGCTGCA
TTGCACCGCG ATATGATCCA TATCCGCCGC AACTGGTTCG GCGTGACGCG CGGCTTGCAA
GGCCAAAACA CGGAGATCGT CCGCCAGGAC AATGAGAAAA AGGTGGTGGT AATGCACCGC
TGGGCAGAAG GCGGTCCGAA AGATAGCGTG GTAGTGGTAT TCAACTTCTC CACCGAAACT
TTCTCCGATT ACAAAATCGG CTTCCCGCGG CCCGGTAAAT GGCACCTCCG CCTCAACACC
GACAACGAAC ACTACGACGC CGACTTCTCT CACCTGGGCG TATTCGACAT CGAAACCAGC
GAAGGCGAAA TGGACATCTA CGAACAATGG GGCGAATTAC AAATTCCCCC ATATTCAGCG
CTGATCTTCT CGCAGGAAGA GTAG
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| Protein sequence | MENLETDVAE TEQHYEGMGA TCHPDGVYYR VWAPHAESVS VIGSFNDWDS SANPLQPEEN
GVWGALVENS KEGDEYKFFL KTPAGELQRN DPYALKVTNS AGNCVVYNHE SFDWQDVSFQ
MPGWHELVIY EMHVGTFNVT EEGQVGTFYT AIERIPYLKD MGFNAVELMP CSEFPGDKSW
GYNPSNPFAI ESDYGGPDGL KAFVKAAHEA GIAVILDVVY NHFGPSDLDL WQFDGWHEND
GGGIYFYNDW RSETPWGNTR PDYGRGEVRQ YIHDNALMWL RDYRIDGLRM DMVPYIRNVK
ANGNPGDDIP EGISLMQWIN KDIRDSCANC ITIAEDMHSL DFITSRVEDG GLGYGSQWDA
KFVHTIRDAI ITANDEDRDM EGVVSAITSR YNNDSFQRII YTESHDEVAN GQARVAEEIA
DGDVDNWYSK KRAALGVALV LTSPGIPMIF QGQPLLEDKW FSDSDPIDWS RLEKFSGFAA
LHRDMIHIRR NWFGVTRGLQ GQNTEIVRQD NEKKVVVMHR WAEGGPKDSV VVVFNFSTET
FSDYKIGFPR PGKWHLRLNT DNEHYDADFS HLGVFDIETS EGEMDIYEQW GELQIPPYSA
LIFSQEE
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