| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0188 |
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| Symbol | |
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| ID | 8223754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 214505 |
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| End bp | 215518 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644928067 |
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| Product | Mammalian cell entry related domain protein |
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| Protein accession | YP_003084624 |
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| Protein GI | 255034003 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.107684 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.968767 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACAT CAACCAAACG CTCGGTCAAC GTAGGCCTTT TCGTCATCAT CGGCATTCTC
ATTTTCGTAG TGGGGATTCT CACCATCGGA AGCATGAAGA AGGTTTTTTC ATCGACTATT
ACCGTCAAAA CCATTTTCGA TGATGTAAAC GGACTGAAAA TCGGTAACAA TATCTGGTAT
TCCGGGGTGA AGATCGGAAC TGTCAAGAGC ATCCGTTTCC TCGACAATTC CAAGGTAGAG
GTAATGCTCA ACATCGAAGA AAAGTCGCAG GAATTCATCC GCAAAAATGC CAAGGCCAAG
GTCAGCACCG ACGGTCTGAT CGGCAACAAG ATCATCGTCA TTTACGGCGG CACGCAAAAA
GTGCCTTCCA TTGAGGACGG CGATGAGCTG CTCGTGGAGA AAATTGAAAG TACGGAAGAA
ATGCTCGCCG TGCTTTCGGA AAACAACAAA AACCTGCTCG GCATCACCAG CGCATTCAAG
ACCATCAGTA AAAACATCCT CGCCGGAAAA GGTACGGTAG GTATGCTGCT TAACGACGAG
CGTCTTTACA ACGACCTCGA CCAGACCCTG GGCGCGATGA AAAAAGCGTC CGTGAATGCG
CAGTCACTCA CTGCCTCGCT GGCCGGCTTC TCGGCGAAAC TGAATGAAAA AGGCGGGCTG
GCGAATGATT TCGCTACGGA CACCGTGATC ATGAAAGACC TTCGGAGCAG CATTGCGCGC
CTGAACGAAA CGGTGTCGTC GGCGAATGTG ATGGTCAATA ACCTGAAAAC AGCCAGCGCG
GATCTCAATT CGAATAAAAC CAGTCCGCTG GGCGTCCTGC TGCACGACGA AGCCACGGCT
TCCAACCTGA AAGAAACGCT GAAAAACCTG GAAAGCACTA CCGAGAAGCT GGACGAAAAC
ATGACCGCGC TTCGTTCCAA CTTCCTGTTT CGCAGGTATT TCCGTAAGAA AGAGAAGGAA
CAGGCCAAGC AGCCGGCCAA AGAAGAAGTA AAAGAGCAGG AGAACCAACA ATAA
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| Protein sequence | MATSTKRSVN VGLFVIIGIL IFVVGILTIG SMKKVFSSTI TVKTIFDDVN GLKIGNNIWY
SGVKIGTVKS IRFLDNSKVE VMLNIEEKSQ EFIRKNAKAK VSTDGLIGNK IIVIYGGTQK
VPSIEDGDEL LVEKIESTEE MLAVLSENNK NLLGITSAFK TISKNILAGK GTVGMLLNDE
RLYNDLDQTL GAMKKASVNA QSLTASLAGF SAKLNEKGGL ANDFATDTVI MKDLRSSIAR
LNETVSSANV MVNNLKTASA DLNSNKTSPL GVLLHDEATA SNLKETLKNL ESTTEKLDEN
MTALRSNFLF RRYFRKKEKE QAKQPAKEEV KEQENQQ
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