Gene Dfer_0186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0186 
Symbol 
ID8223752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp212822 
End bp213994 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content56% 
IMG OID644928065 
Productglycosyl transferase family 2 
Protein accessionYP_003084622 
Protein GI255034001 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0851797 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGATCG TTTTCTGGCT CAGTTTGTTC ATTGTTTTCT ACACATTTCT TGGCTACGGC 
ATCGTGCTGT ACCTGCTCGT GCGCATTCGC AGGGCATTCA GGGGAAAACG GCTCGCACCA
GGTCTCGACC AGGATTTCCC GACGCTCACG CTGGTGATAG CGGCCTACAA CGAGGAAAGC
ATTATTGAAG AAAAAATCGC GGATACGCTC AGCCTGTCGT ACCCGGCGGG CAAGCTGCGG
CTGCTTTTCG TTACCGACGG CTCCACCGAC CGCACGCCGG AACTCGTAGC GAAGTACCCG
CAGATCAAGC TCATGCACAC GCCCGTACGC AGCGGGAAAA TCCTCGCCAT GCACCGTGCT
ATGGACGCAG TGGACACCGA AGTGGTCGTT TTCACGGACG CCAACACGTT TCTGAACAAA
GACGCATTGC TGCTCATTGC CAGGCATTAT GCCGATGCCC GGGTAGGGGC GGTGTCGGGC
GAGAAGCGCG TAATGCAGGA TGCGCTTTCC GATGCCACGG CGGGGGAGGG TTTCTACTGG
AAATACGAAT CGGCCCTCAA AACTTGGGAT TCGGAGCTGT ATTCCGTGGT GGGAGCAGCG
GGCGAGCTGT TCAGCGTGCG GCGGTCGCTG TACCGTTCCG TGGAGCCCGA TACCATTCTC
GACGATTTCA TGATCTCAAT GCAGATCGCC GAAAAGGGTT ACCGCATTGT GTATGAGCCG
GAAGCGTATG CTTCGGAATT GTCGTCAGAG AACATTAAAG AAGAGTTGAA ACGGAAGGTG
CGCATTGCGG CGGGCGGTAT TCAGTCGATA TTGCGCCTGA AAAAGCTGCT GAACCCGTTT
CATGATCCGC TGCTGTCCTT CCAATACATC AGTCACCGCG TGCTTCGCTG GACGGTGACG
CCGTTCCTGA TGATCCTCGC GCTGGTGCTC AATATAATTA TCGTGGCCCA ATCGGGCGGG
CTCATTTATC AGGTGCTGCT CGCCGGACAG GCCGGATTTT ACCTGCTCGC GCTGGCGGGA
TGGGTGCTGG AAACCCGGAA GATCAAAATC AAGGCCCTTT TTGTGCCCTA CTACTTTTGC
ATGATGAACT ACGCGGTGCT GGCGGGCATC CGGCGGTACA TTCGCGGCTC GCAAAGTGCT
GCCTGGGAAA AATCCAAAAG AAAAAGCGCA TAG
 
Protein sequence
MEIVFWLSLF IVFYTFLGYG IVLYLLVRIR RAFRGKRLAP GLDQDFPTLT LVIAAYNEES 
IIEEKIADTL SLSYPAGKLR LLFVTDGSTD RTPELVAKYP QIKLMHTPVR SGKILAMHRA
MDAVDTEVVV FTDANTFLNK DALLLIARHY ADARVGAVSG EKRVMQDALS DATAGEGFYW
KYESALKTWD SELYSVVGAA GELFSVRRSL YRSVEPDTIL DDFMISMQIA EKGYRIVYEP
EAYASELSSE NIKEELKRKV RIAAGGIQSI LRLKKLLNPF HDPLLSFQYI SHRVLRWTVT
PFLMILALVL NIIIVAQSGG LIYQVLLAGQ AGFYLLALAG WVLETRKIKI KALFVPYYFC
MMNYAVLAGI RRYIRGSQSA AWEKSKRKSA