| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0143 |
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| Symbol | |
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| ID | 8223709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 158206 |
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| End bp | 160848 |
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| Gene Length | 2643 bp |
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| Protein Length | 880 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644928022 |
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| Product | heme-binding protein |
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| Protein accession | YP_003084579 |
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| Protein GI | 255033958 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
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| TIGRFAM ID | [TIGR02603] putative heme-binding domain, Pirellula/Verrucomicrobium type |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAAAAA TTACATTAAG CGTATCGGCG TTCCTGCTCA TGCTGTGGAC AACGACTGGC
ACCCTGAAAG AAGAAACAAG ACCCGAAGCC CGCACCCTGG CCCGGGCCGA TTCACTTCCC
AACGCCGCTG CATGGCCCGC GGAACTGAAT GTGACGCATT TTGCAGGCCA CGACCTTACG
CCAAGCCCGG CCTGTTTGGC CGTGGCACCC ACGGGCGAAG TCTTTGTAGG CGTGGATATG
ATCGGGTCGT TGGGCAAAAC CCCCGGCAAA GGAAGCATTG TGCGGCTTGT CGATACGAAT
AACGACGGCA AGGTAGACCA GCACACGACT TTCGCAATGC TCGACAACCC CCGCGGCATT
ATCGCGCAAG GAGATCAGGT TTTTGTGCTA CACACCACTT TTTCCAAAGA AACCGGCAAG
GCGTCGGGGA TGGACCTGGT GGTGCTGGAA GATAAAAACC ACGACGGCGT GGCCGATGGC
CCTGCCAAGC CGCTGATCCA GAACGTGTGT TCGCCGAAAT TCCTGCAAAG CCGCGGTACC
GACCACGCTA CAAATGGTAT CCGAATGGGT ATCGACGGCT GGATTTACAT TGCCGTGGGC
GACTTTGGTT TCCACGACGC GCTGGACCGT TCGGGCAAGA AAATGACGCA GCTCGGCGGC
GGCATCGTGC GCGTACGGCC GGATGGCACC GAAATGGAGG TGTACACGCA CGGCTTGCGG
AACATTTACG ATGTGGCCAT TGACCCATAC ATGAACATTT TCACCCGCGA CAATACCAAT
GACGGCGGCG GTTGGAACAT CCGTTTCAGC AATCAGATCC AGTCTGGAGA ATATGGATAT
CCGGTGTTGT TCAAAAATTT TACGGAAGAA ATCATCCCTG CATTGGTCGA CCTTGGCGGC
GGTTCGGGAA CCGGCTCGCT CTTCATGGAC GATCCTACAT GGCCTGCCAA ATACAACCGC
GTACCGATGA TGGCCGACTG GGGCCGCAGC CAGGTGTACG TCCACCGTAT CACCCCAGAC
GGGCCTACTT TCCAGCAAAA AGAAGAAGAA TTTATCAAAC TTTCACAGGT AACCGACCTG
GATATCGACG CTTCGGGACG TGTTTATTTG GCCGCCTGGG ATGGCGCCGG TTACTCGGGT
AACCCCGGCA AAGGATTTAT TGTGCGTGCA GTGCCTAAGG ACTGGCAGTA TAAGGCTTTC
AAAGACATCA GCAAGTCGTC GGTGAAACAG CTGGCTGCAT TGCTGCGGTC GGAGAGTGCG
GTACAACGCC TTGCGGCGCA GCAGGAATTG CTCAAACGAT CTCCCAAAGA TGCAGCGAAA
GCAGCATGGG GCGTCGCCAA TGATCAGAAG GCGCCTGCCT ACGTGCGCGT GGCAGGTATG
TACACTTACG TGCAGGCAGC AGGGGCGGAC GGGATCGATA ACCTGGTGAA GCTCGCTTCG
GACGATACCA TGCGCGAATA CGCATTGCGT GCATTGGCCG ACCGCAAATC CTACGTTGCC
CAAGTACCGG TGGAGCCTTT CCTGAAAGCG CTCGACGGTG GCAATCCGCG CGAAAAGCTG
GCCGCAGCCA TTGCTTTGGG GCGTTTGGGC CGCCAGGAAG GCGCACAGGC GTTGCTGAAA
GTGAAAGTTC CGGCATCGTT TAAAGCACCC GCGAAAGGTA CCGAAGGCCC GCACGCTACG
CCGAACTCTG CCATTGTAAC GCCGCACATC GCGGTGCGCG CGCTGGTGGC GTTGAATGCC
GTGGATGCGT GTGTGAATGC CATCGGAACC GAAAATTCAA CGATCGCGCT CTGGGCATTG
CGTTACATGC ACGATCCCAA AGCGGTAGAC GGCCTGATCG CCGCCTACGG CAAAACGTCC
GATCAGGCGT TGAAAGGCCA GATTTTGACG ACACTAGGCC GGATCTACAA GAAAGAAGCC
GACTACGACG GCTCCTGGTG GTGGAGCACC CGCCCGGATA CCCACGGCCC GTACTACAAG
GGTATCGACT GGGAAGGATC TGCGAAAATC AAAGATTTCC TGACGGCAGA GTGGAACAAA
GCTACGGACA AGCAGTTATA CGCCGACCTG AATGCGCGTA ACCGCATGGG CATTACGGAA
TTCGGCGGCG AGGAAGTGGT TGCAGCCAAG GAAGAAGTGA AAATCGACCT TGAAAAAATA
CGTAATAAGA AAGGCCAGGT GGGCGAATCG TCGATTGAGG ATGTGATGCT GGCGATGGCG
AAAATACAAG GTGATCCCGC GCTGGGCCGC AAATTGTTCA CCAAGCAGGG CTGCGTGGCC
TGCCACAGCC TGAGCCGCAA CGAAGTAATG AAAGGGCCAT TTATGGGTCA GATTGGCTCG
ATTATGAACC GCGAGCAGAT TGCGGAGTCT ATTTTGAAGC CAAATGCGTC TATTTCGCAA
GGATTTGCGT CGGTGCTCAT CACTACCAAA GGCGACAAGA CCTACATGGG TTTTGTGTCG
GAAGAATCGG CTGAGAAGTT GGTGATCCGG GACATTGCGG GCCAGGTCAA CACGCTGAAA
GTAGCCCACA TTACCTCGCG CAAAGAAATG GAAACGTCGA TGATGCCCCC GGGATTGGCC
AATGAGCTTT CGTATGAAGA ATTTGCTTCA TTGATTACAT TCCTTTCGCA GCAGAAGAAG
TAA
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| Protein sequence | MLKITLSVSA FLLMLWTTTG TLKEETRPEA RTLARADSLP NAAAWPAELN VTHFAGHDLT
PSPACLAVAP TGEVFVGVDM IGSLGKTPGK GSIVRLVDTN NDGKVDQHTT FAMLDNPRGI
IAQGDQVFVL HTTFSKETGK ASGMDLVVLE DKNHDGVADG PAKPLIQNVC SPKFLQSRGT
DHATNGIRMG IDGWIYIAVG DFGFHDALDR SGKKMTQLGG GIVRVRPDGT EMEVYTHGLR
NIYDVAIDPY MNIFTRDNTN DGGGWNIRFS NQIQSGEYGY PVLFKNFTEE IIPALVDLGG
GSGTGSLFMD DPTWPAKYNR VPMMADWGRS QVYVHRITPD GPTFQQKEEE FIKLSQVTDL
DIDASGRVYL AAWDGAGYSG NPGKGFIVRA VPKDWQYKAF KDISKSSVKQ LAALLRSESA
VQRLAAQQEL LKRSPKDAAK AAWGVANDQK APAYVRVAGM YTYVQAAGAD GIDNLVKLAS
DDTMREYALR ALADRKSYVA QVPVEPFLKA LDGGNPREKL AAAIALGRLG RQEGAQALLK
VKVPASFKAP AKGTEGPHAT PNSAIVTPHI AVRALVALNA VDACVNAIGT ENSTIALWAL
RYMHDPKAVD GLIAAYGKTS DQALKGQILT TLGRIYKKEA DYDGSWWWST RPDTHGPYYK
GIDWEGSAKI KDFLTAEWNK ATDKQLYADL NARNRMGITE FGGEEVVAAK EEVKIDLEKI
RNKKGQVGES SIEDVMLAMA KIQGDPALGR KLFTKQGCVA CHSLSRNEVM KGPFMGQIGS
IMNREQIAES ILKPNASISQ GFASVLITTK GDKTYMGFVS EESAEKLVIR DIAGQVNTLK
VAHITSRKEM ETSMMPPGLA NELSYEEFAS LITFLSQQKK
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