| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0139 |
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| Symbol | |
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| ID | 8223705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 152687 |
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| End bp | 153874 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644928018 |
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| Product | formaldehyde dehydrogenase, glutathione- independent |
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| Protein accession | YP_003084575 |
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| Protein GI | 255033954 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
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| TIGRFAM ID | [TIGR02819] formaldehyde dehydrogenase, glutathione-independent |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCCAAA ATCATGGAGT AGCTTACATT AAACCGGGAG AAGTGGAGAT TCAGGAAATT
GAATATCCTA AACTGGCGCT TGGCGACCGC AAATGCGAGC ACGGCGTGAT CCTGAAAATC
GTTTCTACCA ACATTTGCGG TAGCGACCAG CACATGGTTC GCGGACGTAC AACAGCACCG
GCAGGGCTTG TGCTCGGTCA TGAAATCACC GGTCTGGTGA TCGAAGCGGG CCGCGATGTT
GAGTTCATTA AAGTGGGCGA TCTCGTTTCC GTACCGTTCA ACATTGCCTG CGGGCGGTGC
CGTAATTGCA AAGAGGGTAA AACCGGTATT TGCCTCAATG TGAACCCTTC GCGCCCCGGC
GCTGCGTATG GGTATGTGGA TATGGGCGGC TGGGTAGGCG GCCAGGCCGA GTACGTGATG
GTGCCCTACG CCGATTTCAA CCTGCTGAAA TTCCCCGACA AGGACCAGGC GATGGCCAAA
ATCAAGGACC TTACGCTGCT TTCCGATATT TTCCCGACCG GTTTCCACGG TGCTGTTACG
GCCGGGGTAG GCCCGGGCTC CATTGTGTAT GTGGCCGGCG CGGGGCCTGT GGGCCTTGCC
TGTGCGGCTT CCTGCCATTT GCTTGGCGCT GCCGTTGTGA TCGTCGGGGA TATGATTCCC
GAGCGCCTTG CCCAGGCGGC GAGCTTCGGC TGCGAGGTGA TCGATCTCAC GAAGGATACG
CCGCTGGAAC AGGCCATAGC CGAAATCGTG GGTGTTCCCG AAGTAGATTG TTTCGTCGAC
TGCGTGGGTT TCGAAGCCCG TGGTCATGGT GCGCATGCCG TCGAAGAGCG CCCCGCTACC
GTTTTGAACA CGGCTATGGC CGTTACCCGG GCCGGCGGCG CTATTGGTAT TCCGGGCCTC
TACGTTACCG GCGACCCGGG TGCCCGCGAT ACTGCGGCCA AGGAAGGCAG CCTCAGCATA
CGGATCGGCC TCGGATGGGC CAAATCGCAT TCATTCTACA CCGGCCAATG CCCGGTGATG
AAGTACCATC GGAATTTAAT GAATGCGATT TTGTGGGATA AGATTCAAAT CGCAAAGGCT
GTCAATGTGG AAGTAATCTC ACTGCAAGAC GCGCCGAGAG GTTATGCGGA TTTCGACAAA
GGAGCCGCGA AGAAGTTTGT GATCGATCCG CATGGGATGA TTGTTTAA
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| Protein sequence | MCQNHGVAYI KPGEVEIQEI EYPKLALGDR KCEHGVILKI VSTNICGSDQ HMVRGRTTAP
AGLVLGHEIT GLVIEAGRDV EFIKVGDLVS VPFNIACGRC RNCKEGKTGI CLNVNPSRPG
AAYGYVDMGG WVGGQAEYVM VPYADFNLLK FPDKDQAMAK IKDLTLLSDI FPTGFHGAVT
AGVGPGSIVY VAGAGPVGLA CAASCHLLGA AVVIVGDMIP ERLAQAASFG CEVIDLTKDT
PLEQAIAEIV GVPEVDCFVD CVGFEARGHG AHAVEERPAT VLNTAMAVTR AGGAIGIPGL
YVTGDPGARD TAAKEGSLSI RIGLGWAKSH SFYTGQCPVM KYHRNLMNAI LWDKIQIAKA
VNVEVISLQD APRGYADFDK GAAKKFVIDP HGMIV
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