| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0087 |
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| Symbol | |
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| ID | 8223653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 102720 |
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| End bp | 104636 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644927966 |
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| Product | OmpA/MotB domain protein |
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| Protein accession | YP_003084523 |
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| Protein GI | 255033902 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.706049 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCGGA TTATTCTTTT TTGCTTCGCA CTAGGCATTT TTACCCTCCA ATCCGTTTCA
GCTCAGGACG TTACACTATC CAGGACAGCC CGGCAAGTAT ACGATAAGGC ACAAAAAGCC
TGGCAGGAAA GGAAGCTCCC CGAAGCGACC GAGCTGTTTG AAAAAGTGCT CGAAATGGAG
CCGAACAGCT ACGATACGCA TTTGCGGCTC GCGCAGGTAT ACGAACTGCA ACGCAAGCCC
GACCTTACCC GCAAGCATTA TCACAAAGCC GTAGCCCTCC GCCCCGACGC ACCGCAGTCA
GCACCGGCAT TCCAATGGAT CGGTCGCGAC CATTTCAATG CGCAGCGCTA CGATTCCGCG
CAATTTTACT TCGAAAAGGC ATTGCCATTG TTTCCCGCAA AATCGAGTTT GGGACGGCTG
GCAGAGAAGT CCGCAGCTTC GGCGAAGTTC GCAAAGCAGG CTGTGAAAAA TCCGCTACCG
ATCGAAAAAC GGTCCATGGG CGACACGGTG AATTTCCTGG CAACACAGTA TTTCCCGGTG
ATGACGGCCG ATGACGAGAC ATTGATTTTC ACCGGCTTGA CTGAAAACCG GGACGAGAAC
ATTTACTTTA CACGCCGCAT CAAAGGCGAC CGCAGCCCAG ACCGTTGGGA CGTTCCCGAG
GAGATTTCCA AATCCATTAA TACCACCAAT AACGAAGGCA CCTGCACCGT CTCCGCTGAC
GGTCGCACGC TCGTATTCAC GGCCTGCAAC CGCCCCGATG GTCACGGCAG CTGCGATTTG
TACATTTCCC ATAAAGTGGG CAATGAATGG AGCCAGCCTG TTAACCTTGG TCAGGAGGTC
AATTCCCGGG AATGGGATTC GCAGCCCTCG CTTTCGGCCG ATGGTCACAC GCTCTATTTC
GCCTCTGATC GCAAGGGCGG CGTAGGAAAG CGGGATATTT GGATGACGCA GCTGAACGAC
AAGAAGCAAT GGACTGCGCC CAAAAACCTC GGCCCGACCA TCAATACCAC CGACGACGAG
AATGCACCAT TTATTCATGC CAATAACCGC ACGCTGTTTT ATTCTTCCAA CGGCCTGCCG
GGCATGGGTG GCTTCGATAT TTTCATTACC CAAAAAATCG ACACTACGTG GGCACCGCCG
GCCAATATTG GCTACCCTAT CAACACGGTT TCTGATCAGG TAGGCCTGTT TATCGCTTCC
AACGGCGAGA ATGCCTACTA TACCGACGAT AATACAGAAA AAGGCGGCGG GCGCTCGCTG
CTATACACCT TCCGCGTGCC CGAATCGCTG CAAAAAACCA TTACGCCCAC GCGCTACGCG
AAGGGTAAGG TGTTTGATAA GAAAACAGGA ACGGTACTGG CTTCGGACAT CGATCTGTTT
GACCTTAAAA CACAGACGAA AGTAGGTTCT TTCAATTCAG ATAGCCAGAA TGGTTCGTTT
CTGGCGGTTT TGAACAGCGG TGGCGAGTAT GCTTTTTATG TTTCAAAACC GGGTTATTTA
TTTAAAAGCC TTTCATTTAC GGTCAATAAT GAACAGTCGT TTATAAACCT TGAAATCCCG
CTGGAAGCAA TCGAGAAAGA CCGGGCGGAG GTTTTGAATA ACATTTTCTT CAAAACAGGA
GAATATATCC TCGACGACAA ATCGAAAGTG GAGCTCGACA AGATGAGCGA CTTTTTGCAC
AAAAACAAAA CCATTAAAAT CGAAATATCC GGCCATACCG ACGATGTGGG CTCGGATACC
GAGAATATGG CGCTCTCGCA ACGCCGGGCG CAGTCGGTGC AATATTATCT GCAACAGTCG
GGAATTGCGG CGGACCGGAT TTTAGCCAAA GGTTATGGCG AAACAACGCC CAAAGCGCCC
AATGATTCAG ATGAAAACCG GCAGAAAAAC CGAAGGATCG AGTGGCGCAT CCTTTAA
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| Protein sequence | MHRIILFCFA LGIFTLQSVS AQDVTLSRTA RQVYDKAQKA WQERKLPEAT ELFEKVLEME
PNSYDTHLRL AQVYELQRKP DLTRKHYHKA VALRPDAPQS APAFQWIGRD HFNAQRYDSA
QFYFEKALPL FPAKSSLGRL AEKSAASAKF AKQAVKNPLP IEKRSMGDTV NFLATQYFPV
MTADDETLIF TGLTENRDEN IYFTRRIKGD RSPDRWDVPE EISKSINTTN NEGTCTVSAD
GRTLVFTACN RPDGHGSCDL YISHKVGNEW SQPVNLGQEV NSREWDSQPS LSADGHTLYF
ASDRKGGVGK RDIWMTQLND KKQWTAPKNL GPTINTTDDE NAPFIHANNR TLFYSSNGLP
GMGGFDIFIT QKIDTTWAPP ANIGYPINTV SDQVGLFIAS NGENAYYTDD NTEKGGGRSL
LYTFRVPESL QKTITPTRYA KGKVFDKKTG TVLASDIDLF DLKTQTKVGS FNSDSQNGSF
LAVLNSGGEY AFYVSKPGYL FKSLSFTVNN EQSFINLEIP LEAIEKDRAE VLNNIFFKTG
EYILDDKSKV ELDKMSDFLH KNKTIKIEIS GHTDDVGSDT ENMALSQRRA QSVQYYLQQS
GIAADRILAK GYGETTPKAP NDSDENRQKN RRIEWRIL
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