| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0061 |
|---|
| Symbol | |
|---|
| ID | 8223627 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 74345 |
|---|
| End bp | 75361 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 644927940 |
|---|
| Product | nitroreductase |
|---|
| Protein accession | YP_003084497 |
|---|
| Protein GI | 255033876 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0778] Nitroreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.259193 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAATAG GTAAAAAGGC AATCATCGCA GTAGTGGGCC AAGATCGTTT TCTGCGAATG
GCCTTCGTAA AGAATCTGGC ACTTAACTTT TACGCGGATT ATGTCCTCTT CAAGAAACAT
TCCACTGTTT TTAAAGTGGA TAATATTAAG AAAATCGAGG CGAAAATCAT TCTCGATTAT
CATGGCTTGG AGAAAGGAAT GCTATTTGAA CAAATGAAAC CAGCGTTTGC AAAAGAGCGC
ATTCTGAGGC TTCATAAATA TTTAAATCTT GAAGAAGTGA TCCGCCATGC AGCACAGAAC
TCCCAGCTGC GTGTTGCATA CCAGGTTATA TGTAAATATT ATGAGCTACA CCAACAACTG
CAAGTCGACA TAACATCTTT TTACACGGAG GAACAATACA AAAAATATCA AAAGATTCTT
GGCGAAGCTT CTTCTCCAAA TTTTAATGGA GTAATTGAAT ACAACCGAGA AAAATTCTAT
GGCTCAAACA AATCAGAATT TGAAGTCTTC GCTCATTCGC GAAAAAGTAT CCGTGATTTC
ACCGGAGAAA AAATTCCGAA AGATGTAATT GACCGTGCAA TCGAACTCGC GCTGACCGCT
CCATCTGTTT GTAACCGCCA AGCAAGTAAC GTATATCTGA TAGAGGACAA GGAAAAAATC
GATCGTGTGC TGGAAGTCCA GGGGGGCTTC AAAGGCTATG GCAAAAATGT CAGTCAGCTC
CTAATATTGA CTAACGACAG AAACTTCTAC TATACTATTG GAGAGCGAAA TCAGCTATAC
GTAGACGGCG GAATTTTTTT AATGAATCTT CTCTACTCGC TGCACTACTA CGAGATTGCA
AATTGCCCGG CGAACTGGGG AAAAGAAGTA ACTGCGGAAA GAAAGCTAAG TCAATTTGTA
ACCATACCGG AATCGCAAAA AATCATTTGT ATAATCCCAA TTGGAGTTTC GCGTGAAAAG
TTTAGAGTGA CCCTTTCCGA GCGTAGGCCT CTAAATGAAG TTCTAAAAAC ACTCTAG
|
|---|
| Protein sequence | MAIGKKAIIA VVGQDRFLRM AFVKNLALNF YADYVLFKKH STVFKVDNIK KIEAKIILDY
HGLEKGMLFE QMKPAFAKER ILRLHKYLNL EEVIRHAAQN SQLRVAYQVI CKYYELHQQL
QVDITSFYTE EQYKKYQKIL GEASSPNFNG VIEYNREKFY GSNKSEFEVF AHSRKSIRDF
TGEKIPKDVI DRAIELALTA PSVCNRQASN VYLIEDKEKI DRVLEVQGGF KGYGKNVSQL
LILTNDRNFY YTIGERNQLY VDGGIFLMNL LYSLHYYEIA NCPANWGKEV TAERKLSQFV
TIPESQKIIC IIPIGVSREK FRVTLSERRP LNEVLKTL
|
|---|
| |