| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_4124 |
|---|
| Symbol | |
|---|
| ID | 8139498 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | + |
|---|
| Start bp | 4708764 |
|---|
| End bp | 4709690 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644871739 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_003023897 |
|---|
| Protein GI | 253702708 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 68 |
|---|
| Fosmid unclonability p-value | 0.175412 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCTAG TAAATCTCAA AACACTCATT GAGACTGTTG AACGCGGCAG CTTCTCCAAA
GCTGCGGATA CGCTCTGTGT GACTCAGTCC GCGGTCTCAC GACGCATCAA GATACTTGAG
GACCATTACG GTCACCTACT TCTTGACCGT TCAGGCCCCG TCCTCAAGCC GACGCCTGTT
GGAGACCTTC TGATTGAGAA GGCGCGCCAG CTATTAAAAC TTGAACAGGA ATTCGTACAC
GAAGTCCAGG CCCTGAATCA GAAAAACAAG ATCTCTTTCT GCTGCACTAC CCCCTTCGGC
GTCTCCTATC TCCCCGAAAT CTTCACACGG TTCATGGCCA ACAGCGCCCA AAACACAGAG
CTGCAGTTCG TGTTCGAGAT GCCTGAGGCG GCGCTCAAAG GGCTCAGGGA AAAACTCTTC
GACCTGGTGC TCATCGAGTA CTGTGAAGAC CTGAACCTGC AGGAGTTCGA CAGCTACCCC
CTCCCCGACG ACGAAATGGT CTTCGTCAGC GCCCCGGGCT ACGGCATCGA CTCCCCGCTG
GTCGAGGTCG ACACCCTGCT TTCGCAACGC CTTTACTGTA AGAAAAGCGG TTGCTGCGCG
CGGCGCTTCC TTGAAAAGAG CATGCAAACC CTGGGAAGAG ACGCGGCGGA GTTCAGCAAT
ACGGTCTTCT TCGACGACAT CCCCTTCATC ATCAGGGCCG TCATAGCCGG CAACGGGATC
ACTTTCATCT CGCGCAGCGT CGTCGCCTCC GCCCTGGAAA GCGGCGAACT CATCTCGCAC
CAGGTCCAGG GGTTCGACAC CTCCCGCCCA CGGCGGTTGG TGCTCAGGCG CGATTGCAGC
CCCGACCCGG CACTGCTCGA TTTCATCCAG GAGATCTTCC GGCACTTCTC CCTCGCCCCT
CCCCCCCAGT TCGCCACCGC AGCCTGA
|
|---|
| Protein sequence | MDLVNLKTLI ETVERGSFSK AADTLCVTQS AVSRRIKILE DHYGHLLLDR SGPVLKPTPV
GDLLIEKARQ LLKLEQEFVH EVQALNQKNK ISFCCTTPFG VSYLPEIFTR FMANSAQNTE
LQFVFEMPEA ALKGLREKLF DLVLIEYCED LNLQEFDSYP LPDDEMVFVS APGYGIDSPL
VEVDTLLSQR LYCKKSGCCA RRFLEKSMQT LGRDAAEFSN TVFFDDIPFI IRAVIAGNGI
TFISRSVVAS ALESGELISH QVQGFDTSRP RRLVLRRDCS PDPALLDFIQ EIFRHFSLAP
PPQFATAA
|
|---|
| |